Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88892 | Sorghum | cytosol | 91.16 | 92.13 |
| Zm00001d036507_P003 | Maize | cytosol | 86.98 | 85.88 |
| Os04t0550400-01 | Rice | nucleus | 67.21 | 65.38 |
| TraesCS3A01G369300.2 | Wheat | nucleus | 59.77 | 59.08 |
| TraesCS3D01G362300.2 | Wheat | nucleus | 59.3 | 58.62 |
| TraesCS3B01G401200.2 | Wheat | nucleus | 59.07 | 58.39 |
| TraesCS6B01G274100.2 | Wheat | nucleus | 59.19 | 58.1 |
| TraesCS6D01G233000.5 | Wheat | nucleus | 58.72 | 57.65 |
| TraesCS6A01G251200.2 | Wheat | nucleus | 58.26 | 57.19 |
| HORVU0Hr1G018210.6 | Barley | nucleus | 56.98 | 56.13 |
| GSMUA_Achr4P26970_001 | Banana | nucleus | 24.53 | 55.24 |
| GSMUA_Achr1P01610_001 | Banana | nucleus | 51.4 | 50.17 |
| GSMUA_Achr4P26960_001 | Banana | nucleus | 26.4 | 44.86 |
| VIT_15s0021g02140.t01 | Wine grape | nucleus | 44.77 | 43.85 |
| Solyc11g013370.1.1 | Tomato | nucleus | 42.56 | 43.21 |
| KRH30315 | Soybean | nucleus | 43.26 | 42.32 |
| KRH75261 | Soybean | nucleus | 42.56 | 41.59 |
| AT2G44950.1 | Thale cress | nucleus | 39.88 | 39.07 |
| CDY27400 | Canola | nucleus | 38.84 | 38.26 |
| Bra040332.1-P | Field mustard | nucleus | 39.07 | 38.23 |
| CDY18962 | Canola | nucleus | 38.72 | 38.14 |
| CDY37020 | Canola | nucleus | 38.72 | 37.97 |
| CDX74700 | Canola | nucleus | 38.72 | 37.8 |
| Bra004879.1-P | Field mustard | nucleus | 38.49 | 36.62 |
| Zm00001d029490_P004 | Maize | nucleus | 29.3 | 28.16 |
Protein Annotations
| EntrezGene:103626393 | MapMan:19.2.2.1.5.3.2 | Gene3D:3.30.40.10 | UniProt:A0A1D6GUS1 | ProteinID:AQK66688.1 | ProteinID:AQK66691.1 |
| ProteinID:AQK66701.1 | ncoils:Coil | InterPro:E3_ubiquit_lig_Bre1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010390 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0016874 | GO:GO:0019538 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13923 |
| ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR23163 | PANTHER:PTHR23163:SF3 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI000842C2EF | EnsemblPlantsGene:Zm00001d014640 | EnsemblPlants:Zm00001d014640_P035 | EnsemblPlants:Zm00001d014640_T035 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
E3 ubiquitin-protein ligase BRE1-like 1
Coordinates
chr5:+:56927595..56942351
Molecular Weight (calculated)
98435.6 Da
IEP (calculated)
7.405
GRAVY (calculated)
-0.618
Length
860 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTCLHVQDP RNIAMSRPLD FAVLKYKNQK LAEQLEVHKF EFCALESRFN DLKEKQRTHN KTLVLVKSYW ERLIADLGIV SVCKNESSRS SCSTGNNNIR
101: KDGICFHLET DFLNGLLEAG ATESSGSPNC QLGNDVSSEQ STTIDILQKL FLPSSGPWHV NNEFVSAALM KLPENEHSRQ LHNATSDVLS KLHVVMRTVD
201: NLHLKHRQLA ANYQKQRDSS AWNRAEQKRL KEELTSVVAK LEGSKQKLAV LKAQGDNKQA TPILVPTLGN KNMTAEKVRD KQTELQDLEA THKELMELIS
301: KRLEEIRRLH TERIEILNKL ATFQNILTDF KSIHSSKAFQ LVNDQLQKSQ AELDDHQTLL EKLQVEMDTF VWRERQFNQK VDLAEIPQKV SAYCVSRIAD
401: LEKDVQKLCN EKNMLVLKLE EASREPGRNQ VISEFKALVS SLPREMGAVQ SELSKHKDAS LQLHSLRAEV HSLSSIQTRK EQEIEEMSFR SAHAGSDISQ
501: LQSLVRELRE NTQELKLFVE LYKHESTDSR QLMESRDREL AEWARVHILK YSLSESKLEQ RVISANEAEA ISQQRLATAE AEIAELGQKL ETSRRDLVKQ
601: SDILKSKHEE CEAYVVEIES IGHAYEDIMS QNQQLLQQII ERDDHNTKLF MEGVKSKQSH DALHLEVRSL QRNLQHASTL MDLCNQKTIR LEDQLRGWSE
701: RLRRLSEDGM QQSISLGNYQ KKLSGMHGEA PKLRQSMDVL QAKAGSNRLE IAELLIELEN ERFGKKRLED DLDLMSSKAN SLREKTDNSA VLQKLLHEAK
801: EYRGILKCGI CHDRQKEVVI AKCYHLFCSQ CIQKPLGSRQ KRCPSCGLSF GVNDVKPIYI
101: KDGICFHLET DFLNGLLEAG ATESSGSPNC QLGNDVSSEQ STTIDILQKL FLPSSGPWHV NNEFVSAALM KLPENEHSRQ LHNATSDVLS KLHVVMRTVD
201: NLHLKHRQLA ANYQKQRDSS AWNRAEQKRL KEELTSVVAK LEGSKQKLAV LKAQGDNKQA TPILVPTLGN KNMTAEKVRD KQTELQDLEA THKELMELIS
301: KRLEEIRRLH TERIEILNKL ATFQNILTDF KSIHSSKAFQ LVNDQLQKSQ AELDDHQTLL EKLQVEMDTF VWRERQFNQK VDLAEIPQKV SAYCVSRIAD
401: LEKDVQKLCN EKNMLVLKLE EASREPGRNQ VISEFKALVS SLPREMGAVQ SELSKHKDAS LQLHSLRAEV HSLSSIQTRK EQEIEEMSFR SAHAGSDISQ
501: LQSLVRELRE NTQELKLFVE LYKHESTDSR QLMESRDREL AEWARVHILK YSLSESKLEQ RVISANEAEA ISQQRLATAE AEIAELGQKL ETSRRDLVKQ
601: SDILKSKHEE CEAYVVEIES IGHAYEDIMS QNQQLLQQII ERDDHNTKLF MEGVKSKQSH DALHLEVRSL QRNLQHASTL MDLCNQKTIR LEDQLRGWSE
701: RLRRLSEDGM QQSISLGNYQ KKLSGMHGEA PKLRQSMDVL QAKAGSNRLE IAELLIELEN ERFGKKRLED DLDLMSSKAN SLREKTDNSA VLQKLLHEAK
801: EYRGILKCGI CHDRQKEVVI AKCYHLFCSQ CIQKPLGSRQ KRCPSCGLSF GVNDVKPIYI
001: MASTGEPDRK RRHFSSISPS EAAAAVKKQP FFWPSSEDKL DTAVLQFQNL KLSQKLEAQQ VECSILEDKL SQIKEKQLPY NSSLKTVHKS WEKLTASVES
101: CSVRVSDSSS GAHRFVNKED GSSPAVKNDF INRLLETGAT ESSSSNICSN QMEENGVNTS SQMTQTLYNL VAATEDLRCL KDELYPTVLR TNLGKDLCGQ
201: LALSELESEI KSFRGDLDDV LVKFKSLSRE LQSHRDADAK VRVDLKRIRG ELEDEVVELQ QCNGDLSALR AERDATAGAF FPVLSLGNKL ATSDRERDKQ
301: RDLQDMETVL KELTVLASGR LQQLKNLHEE RTKMLGKMSN LQNKSKSVRC ISSSQACLSL KDQLEKSKEA VFQYMALLEK LQVEKDSIVW KEREINIKNE
401: LGDVSRKTSA VTDSRMASLD SEIQKQLDEK MRIKTRLGNI SRERGRKEIF ADMKALISSF PEEMSSMRSQ LNNYKETAGG IHSLRADVQS LSGVLCRKTK
501: EYEALQLRSA DYASQLGDLN ATVCDLKNSH EELKLFLDMY KRESTDARDI AEAKEQEYRA WAHVQSLKSS LDEQNLELRV KAANEAEAVS QQMLAAAEAE
601: IADLRQKMDD CKRDVAKHSD ILKSKHEEHG TYLSEIQTIG SAYEDIVPQN QQLLLQVTER DDYNIKLFLE GITSRQMQDT LLIDKYIMDK DIQQGSAYAS
701: FLSKKSSRIE DQLRFCTDQF QKLAEDKYQK SVSLENLQKK RADIGNGLEQ ARSRLEESHS KVEQSRLDYG ALELELEIER FNRRRIEEEM EIAKKKVSRL
801: RSLIEGSSAI QKLRQELSEF KEILKCKACN DRPKEVVITK CYHLFCNPCV QKLTGTRQKK CPTCSASFGP NDIKPIYI
101: CSVRVSDSSS GAHRFVNKED GSSPAVKNDF INRLLETGAT ESSSSNICSN QMEENGVNTS SQMTQTLYNL VAATEDLRCL KDELYPTVLR TNLGKDLCGQ
201: LALSELESEI KSFRGDLDDV LVKFKSLSRE LQSHRDADAK VRVDLKRIRG ELEDEVVELQ QCNGDLSALR AERDATAGAF FPVLSLGNKL ATSDRERDKQ
301: RDLQDMETVL KELTVLASGR LQQLKNLHEE RTKMLGKMSN LQNKSKSVRC ISSSQACLSL KDQLEKSKEA VFQYMALLEK LQVEKDSIVW KEREINIKNE
401: LGDVSRKTSA VTDSRMASLD SEIQKQLDEK MRIKTRLGNI SRERGRKEIF ADMKALISSF PEEMSSMRSQ LNNYKETAGG IHSLRADVQS LSGVLCRKTK
501: EYEALQLRSA DYASQLGDLN ATVCDLKNSH EELKLFLDMY KRESTDARDI AEAKEQEYRA WAHVQSLKSS LDEQNLELRV KAANEAEAVS QQMLAAAEAE
601: IADLRQKMDD CKRDVAKHSD ILKSKHEEHG TYLSEIQTIG SAYEDIVPQN QQLLLQVTER DDYNIKLFLE GITSRQMQDT LLIDKYIMDK DIQQGSAYAS
701: FLSKKSSRIE DQLRFCTDQF QKLAEDKYQK SVSLENLQKK RADIGNGLEQ ARSRLEESHS KVEQSRLDYG ALELELEIER FNRRRIEEEM EIAKKKVSRL
801: RSLIEGSSAI QKLRQELSEF KEILKCKACN DRPKEVVITK CYHLFCNPCV QKLTGTRQKK CPTCSASFGP NDIKPIYI
Arabidopsis Description
HUB1E3 ubiquitin-protein ligase BRE1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.