Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02004 | Sorghum | cytosol | 87.25 | 89.02 |
| Zm00001d042275_P001 | Maize | cytosol | 80.08 | 80.08 |
| TraesCS3B01G475100.1 | Wheat | cytosol | 71.71 | 75.31 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 71.31 | 74.58 |
| TraesCS3A01G440900.1 | Wheat | cytosol | 72.51 | 73.98 |
| TraesCS3A01G441100.2 | Wheat | cytosol | 70.52 | 73.75 |
| Os01t0926800-01 | Rice | cytosol, mitochondrion | 72.51 | 73.68 |
| TraesCS3B01G475000.1 | Wheat | cytosol | 71.71 | 73.17 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 72.51 | 73.09 |
| TraesCS3A01G441000.1 | Wheat | cytosol | 68.92 | 70.9 |
| HORVU3Hr1G096280.6 | Barley | plastid | 70.92 | 57.79 |
| Bra032645.1-P | Field mustard | cytosol | 51.0 | 55.41 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 56.57 | 53.99 |
| KRH41051 | Soybean | cytosol | 51.79 | 52.42 |
| Bra033247.1-P | Field mustard | cytosol | 52.19 | 51.37 |
| CDX90047 | Canola | cytosol | 52.19 | 51.37 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 52.19 | 51.17 |
| AT1G01630.1 | Thale cress | cytosol | 51.39 | 50.59 |
| CDY15164 | Canola | cytosol | 51.39 | 50.59 |
| HORVU3Hr1G096290.4 | Barley | plastid | 70.92 | 50.57 |
| CDY38020 | Canola | cytosol | 51.79 | 49.62 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 48.61 | 49.59 |
| KRH54081 | Soybean | cytosol | 49.0 | 46.42 |
| Zm00001d012847_P001 | Maize | cytosol | 50.6 | 46.01 |
| KRH63881 | Soybean | cytosol | 47.81 | 45.45 |
| Solyc03g118150.2.1 | Tomato | cytosol | 48.61 | 45.02 |
| PGSC0003DMT400036745 | Potato | cytosol | 48.21 | 44.65 |
| Zm00001d009968_P001 | Maize | cytosol | 52.19 | 41.99 |
| Zm00001d034765_P001 | Maize | cytosol | 47.41 | 41.75 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 45.82 | 40.21 |
| Solyc06g068800.2.1 | Tomato | cytosol | 47.81 | 38.84 |
| PGSC0003DMT400065724 | Potato | cytosol | 47.41 | 38.51 |
| Zm00001d033836_P001 | Maize | nucleus | 24.3 | 20.68 |
| Zm00001d010499_P001 | Maize | plastid | 23.51 | 20.56 |
| Zm00001d040360_P001 | Maize | cytosol | 25.5 | 20.25 |
| Zm00001d037794_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 22.31 | 19.11 |
| Zm00001d052231_P003 | Maize | cytosol | 24.7 | 17.71 |
| Zm00001d045573_P004 | Maize | plastid | 11.16 | 17.39 |
| Zm00001d033837_P001 | Maize | plastid | 19.52 | 16.44 |
| Zm00001d019055_P001 | Maize | cytosol | 9.96 | 15.72 |
| Zm00001d028231_P003 | Maize | cytosol | 23.11 | 12.83 |
| Zm00001d048066_P001 | Maize | cytosol | 22.31 | 12.81 |
| Zm00001d045574_P002 | Maize | plastid | 21.91 | 10.7 |
Protein Annotations
| EntrezGene:100283884 | Gene3D:3.40.525.10 | MapMan:35.2 | EMBL:BT063722 | UniProt:C0P603 | InterPro:CRAL-TRIO_dom |
| InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | ProteinID:ONM34942.1 |
| PFAM:PF00650 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0001948EFA | EnsemblPlantsGene:Zm00001d042274 | EnsemblPlants:Zm00001d042274_P001 | EnsemblPlants:Zm00001d042274_T001 |
| SEG:seg | : | : | : | : | : |
Description
Sec14p-like phosphatidylinositol transfer family protein
Coordinates
chr3:-:158531434..158534266
Molecular Weight (calculated)
28519.6 Da
IEP (calculated)
8.847
GRAVY (calculated)
-0.262
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAAGGGAA GEGEWLKVSQ LRPMVEAQDP NAKAVDNLTL RRFLRARDHD VDKASAMFLK FLKWRREAAP GGSVPEEQVR RELSQDKLCM GGVDRAGRPI
101: LVAFAARHFS AGRDMAEFKS FVVYFFDKIC ARIPRGQEKF LCIVDLKGWG YSNCDVRAYI AAIEILQNYY PERLGKALMI HVPYIFMKAW KMIYPFIDTN
201: TRDKFVFVED KSLQETLRRE IDEGQLPEFL GGKMDVIPLK DYGVQQQPQA V
101: LVAFAARHFS AGRDMAEFKS FVVYFFDKIC ARIPRGQEKF LCIVDLKGWG YSNCDVRAYI AAIEILQNYY PERLGKALMI HVPYIFMKAW KMIYPFIDTN
201: TRDKFVFVED KSLQETLRRE IDEGQLPEFL GGKMDVIPLK DYGVQQQPQA V
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.