Factsheet for Zm00001d045574_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045573_P004	Maize	plastid	29.77	95.03
KXG19106	Sorghum	plastid	46.11	92.58
Os02t0321500-01	Rice	mitochondrion	40.47	79.69
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	40.08	78.63
HORVU0Hr1G022240.10	Barley	mitochondrion	39.88	78.24
GSMUA_Achr3P14480_001	Banana	mitochondrion	34.24	67.18
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	39.88	66.99
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	40.27	66.77
Solyc03g112640.2.1	Tomato	plastid	31.71	62.21
PGSC0003DMT400046785	Potato	mitochondrion	31.32	61.45
VIT_17s0000g08850.t01	Wine grape	mitochondrion	30.54	60.38
KRH03256	Soybean	endoplasmic reticulum, plastid	30.74	60.31
KRH57102	Soybean	cytosol, plastid	30.74	60.31
AT5G63060.1	Thale cress	plastid	29.57	57.79
Bra035864.1-P	Field mustard	plastid	28.4	57.48
CDY16746	Canola	plastid	28.4	57.48
CDX87279	Canola	plastid	28.4	57.48
Zm00001d042274_P001	Maize	cytosol	10.7	21.91
Zm00001d042275_P001	Maize	cytosol	10.12	20.72
Zm00001d012847_P001	Maize	cytosol	10.51	19.57
Zm00001d010499_P001	Maize	plastid	9.92	17.77
Zm00001d040360_P001	Maize	cytosol	10.89	17.72
Zm00001d037794_P001	Maize	cytosol, mitochondrion, nucleus, plastid	9.73	17.06
Zm00001d033836_P001	Maize	nucleus	9.53	16.61
Zm00001d052231_P003	Maize	cytosol	11.28	16.57
Zm00001d033837_P001	Maize	plastid	8.75	15.1
Zm00001d009968_P001	Maize	cytosol	8.75	14.42
Zm00001d034765_P001	Maize	cytosol	7.39	13.33
Zm00001d019055_P001	Maize	cytosol	3.7	11.95
Zm00001d048066_P001	Maize	cytosol	9.53	11.21
Zm00001d028231_P003	Maize	cytosol	9.14	10.4

Protein Annotations

EntrezGene:100273575	Gene3D:2.40.30.10	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A1D6NX20	ProteinID:AQL02641.1
ProteinID:AQL02644.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865
PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00516
SUPFAM:SSF46938	SUPFAM:SSF52087	SUPFAM:SSF63380	UniParc:UPI00084308B4	EnsemblPlantsGene:Zm00001d045574	EnsemblPlants:Zm00001d045574_P002
EnsemblPlants:Zm00001d045574_T002	SEG:seg	:	:	:	:

Description

Sec14p-like phosphatidylinositol transfer family protein

Coordinates

chr9:+:27069810..27084050

Molecular Weight (calculated)

57534.5 Da

IEP (calculated)

9.871

GRAVY (calculated)

-0.297

Length

514 amino acids

Sequence
(BLAST)

001: MMTVSTSCYM CRFLVRAPPL KSRSAVRCPS AAPPGASGAT STSKLVLEVK ERLAREHPGL PTGRYGRDDD DMVLWFLKDR KFSVDEAVSK LTKAIKWRQD
101: FGVAELSEES VKSLYQTGKA YVHDSLDIYG RPVLIVVAAK HFPSTQDPVE NQKLCAYLVE KAVNRLPPGA ENILGIFDLR GFRVENGDLQ FLKFLMDVFY
201: YYYPKRLGQV LFVDAPFVFQ PMWQVVKPLL KSYASLVHIN QLHSGRLNCN TTTSAITEKS GQQRRGSSDP HVQMPAWSFT WFQEESFPSS SAVVAKASPA
301: SPCAAPHFRP RAVRAAIRAQ ASAVEAPATA KAKKESKKQE EGVVTNLYKP KEPYVGRCLL NTKITGDDAP GETWHMVFST EGPSLPARGL RIRGEKKRKE
401: KMMTVSTSCY MCRSLVRAPP LKSRSATQDP VGNQKLCAYL VEKAVSRLPP GVENILGIFD LRGFRVENGD LQFLKFLVVK PLLKSYASLV RFCDAETVRK
501: EYFKEEIVPP DFRD

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.