Factsheet for Bra035864.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16746	Canola	plastid	98.82	98.82
AT5G63060.1	Thale cress	plastid	88.98	85.93
VIT_17s0000g08850.t01	Wine grape	mitochondrion	64.57	63.08
Solyc03g112640.2.1	Tomato	plastid	62.2	60.31
PGSC0003DMT400046785	Potato	mitochondrion	61.42	59.54
HORVU0Hr1G022240.10	Barley	mitochondrion	60.24	58.4
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	60.24	58.4
KXG19106	Sorghum	plastid	58.66	58.2
KRH57102	Soybean	cytosol, plastid	59.84	58.02
KRH03256	Soybean	endoplasmic reticulum, plastid	59.84	58.02
Os02t0321500-01	Rice	mitochondrion	59.45	57.85
GSMUA_Achr3P14480_001	Banana	mitochondrion	57.87	56.11
Zm00001d045573_P004	Maize	plastid	33.07	52.17
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	59.84	49.03
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	59.06	49.02
Zm00001d045574_P002	Maize	plastid	57.48	28.4
Bra032645.1-P	Field mustard	cytosol	21.26	23.38
Bra033247.1-P	Field mustard	cytosol	20.47	20.39
Bra012311.1-P	Field mustard	cytosol	24.41	20.33
Bra011696.1-P	Field mustard	nucleus	22.44	19.66
Bra010566.1-P	Field mustard	cytosol	22.44	19.45
Bra000655.1-P	Field mustard	cytosol	23.62	19.42
Bra017768.1-P	Field mustard	cytosol	22.05	19.38
Bra026185.1-P	Field mustard	cytosol	18.11	18.78
Bra031370.1-P	Field mustard	cytosol	23.23	18.32
Bra026803.1-P	Field mustard	cytosol	17.72	17.72
Bra026802.1-P	Field mustard	cytosol	13.39	16.43
Bra015863.1-P	Field mustard	cytosol	23.62	15.62
Bra039949.1-P	Field mustard	cytosol	19.29	12.22
Bra023828.1-P	Field mustard	nucleus	19.29	12.1
Bra032465.1-P	Field mustard	cytosol	19.68	12.02
Bra015421.1-P	Field mustard	cytosol	17.32	10.95

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EnsemblPlantsGene:Bra035864	EnsemblPlants:Bra035864.1	EnsemblPlants:Bra035864.1-P	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	InterPro:IPR001251	InterPro:IPR036865	UniProt:M4F464	PFAM:PF00650
PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI000254210C	SEG:seg	:	:	:	:

Description

AT5G63060 (E=2e-062) | transporter

Coordinates

chrA09:-:3232617..3234152

Molecular Weight (calculated)

29077.0 Da

IEP (calculated)

8.901

GRAVY (calculated)

-0.154

Length

254 amino acids

Sequence
(BLAST)

001: MSIRLSSTLF AASISFKNPK SSYSDRSRSC RFSVRSCVSD SPNANKLVLE VKERLAKDCT SLPIGKNGRD DEEMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVNELSE DSVKAAAETG KAYVHGFLDV KGRPVVILLD PIEDEKLCVF LLEKALSKLP AGQHKILGIF DLRGFGSQNA DLKFLTFLFD VFYYYYPSRL
201: DEVLFVDAPF IFQPIWQFTK PVVKSYASLV KFCSVETVRK EYFTEETIPS NFRS

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.