Factsheet for Bra039949.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G22410.1	Thale cress	cytosol	85.04	85.25
Bra023828.1-P	Field mustard	nucleus	82.79	81.98
KRH35529	Soybean	cytosol	62.34	61.88
CDY10638	Canola	nucleus	57.86	61.7
KRG91288	Soybean	cytosol	61.85	61.39
Bra015421.1-P	Field mustard	cytosol	58.6	58.46
Bra032465.1-P	Field mustard	cytosol	60.35	58.17
Solyc09g075970.2.1	Tomato	cytosol	61.1	57.92
PGSC0003DMT400077340	Potato	cytosol	60.6	57.45
GSMUA_Achr6P25200_001	Banana	cytosol	53.37	50.23
GSMUA_Achr3P29630_001	Banana	cytosol	53.62	50.23
GSMUA_Achr7P27040_001	Banana	cytosol	53.37	49.2
Os03t0219100-01	Rice	cytosol	52.87	48.4
EER95261	Sorghum	cytosol	51.12	46.17
GSMUA_Achr5P08620_001	Banana	nucleus	53.37	46.12
TraesCS4D01G242900.1	Wheat	cytosol	50.37	44.99
Zm00001d028231_P003	Maize	cytosol	50.37	44.69
Zm00001d048066_P001	Maize	cytosol	48.63	44.62
TraesCS4B01G243300.1	Wheat	cytosol	49.63	44.03
TraesCS4A01G065900.1	Wheat	cytosol	50.37	44.01
HORVU4Hr1G067410.4	Barley	plastid	44.39	35.67
Bra032645.1-P	Field mustard	cytosol	13.97	24.24
Bra033247.1-P	Field mustard	cytosol	14.96	23.53
Bra012311.1-P	Field mustard	cytosol	17.46	22.95
Bra000655.1-P	Field mustard	cytosol	16.96	22.01
Bra031370.1-P	Field mustard	cytosol	17.21	21.43
Bra026185.1-P	Field mustard	cytosol	12.47	20.41
Bra035864.1-P	Field mustard	plastid	12.22	19.29
Bra010566.1-P	Field mustard	cytosol	13.97	19.11
Bra026803.1-P	Field mustard	cytosol	11.97	18.9
Bra011696.1-P	Field mustard	nucleus	13.47	18.62
Bra017768.1-P	Field mustard	cytosol	13.22	18.34
Bra026802.1-P	Field mustard	cytosol	8.98	17.39
Bra015863.1-P	Field mustard	cytosol	15.21	15.89

Protein Annotations

EnsemblPlants:Bra039949.1	EnsemblPlants:Bra039949.1-P	EnsemblPlantsGene:Bra039949	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650
PFscan:PS50191	SEG:seg	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002547450
UniProt:M4FFS5	MapMan:35.2	:	:	:	:

Description

AT3G22410 (E=2e-177) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05370.1); Has 1032 Blast hits to 1032 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 243; Plants - 390; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).

Coordinates

chrA05:+:15480969..15483730

Molecular Weight (calculated)

45249.2 Da

IEP (calculated)

10.638

GRAVY (calculated)

-0.370

Length

401 amino acids

Sequence
(BLAST)

001: MGKRDEKAEA VLRLLRKQTP LTLKQEKFCN RDCVERFLKG KGDNVKKAAK QLTSCLSWRQ NFDIERIGAE EFSAELADGV AYIAGHDGES RPVIMFRFKH
101: DYQKLRSQKQ FTRLVAFTME TAISSMSRNA EQSVVLLFDA SFFRSSSAFA NLLLATLKII ADNYPCRLHK AFIIDPPSFF SYIWKGVRPF VELSTVTMLI
201: SSLDYDEQLD FSHVSSSSCL RSASLRFDPS SIKSTAKIGS ASSRFAFTVS HNSMKPWYLS LTDTSPFHAA VDSTASKVSP LSVRSLSFAS PAGRGLRDPK
301: PAACRKSLFP STPLPEKTKT VPHRKTPRPS FFQSPAMFFR GEKNVGGGEK SSREAFVPYL KFYRRPYDET AYRSKLRGPR GFVSVVSSHR RCRHVSLSQR
401: F

Best Arabidopsis Sequence Match ( AT3G22410.1 )
(BLAST)

001: MGKKDEKVEA VLRLVKKQSP LTFKQEKFCN RECVERFLKV KGDNVKKAAK QLSSCLSWRQ NFDIERLGAE EFSTELSDGV AYISGHDRES RPVIIFRFKH
101: DYQKLHTQKQ FTRLVAFTIE TAISSMSRNT EQSFVLLFDA SFFRSSSAFA NLLLATLKII ADNYPCRLYK AFIIDPPSFF SYLWKGVRPF VELSTATMIL
201: SSLDYDEPLD ITHVSSNPRS TSLRFDASSI KSTASIGSAS SRFAFTVSQN SLKPWYLSFT DTSPYNPAVS SSAAAPVSPL SARSLPFASP AVRGFKDAKP
301: AACRKSLFPS TPLPEKTKTV SYRKTPRPSF FQSPAMFFRR ENNVGGGGEK SREAFVPYLK FYRRPYDETA YRSKLRGPRG FLSVVSSHRR SRHVSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9LUV9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.