Factsheet for HORVU4Hr1G067410.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G243300.1	Wheat	cytosol	71.54	78.98
TraesCS4D01G242900.1	Wheat	cytosol	70.14	77.95
TraesCS4A01G065900.1	Wheat	cytosol	70.74	76.91
Os03t0219100-01	Rice	cytosol	61.72	70.32
EER95261	Sorghum	cytosol	60.72	68.24
Zm00001d048066_P001	Maize	cytosol	59.52	67.96
Zm00001d028231_P003	Maize	cytosol	60.72	67.04
GSMUA_Achr3P29630_001	Banana	cytosol	51.3	59.81
GSMUA_Achr7P27040_001	Banana	cytosol	50.7	58.16
GSMUA_Achr6P25200_001	Banana	cytosol	48.7	57.04
GSMUA_Achr5P08620_001	Banana	nucleus	49.1	52.8
VIT_05s0020g03350.t01	Wine grape	cytosol	44.29	52.25
CDY64658	Canola	cytosol	35.27	51.61
PGSC0003DMT400077340	Potato	cytosol	43.49	51.3
Solyc09g075970.2.1	Tomato	cytosol	43.29	51.06
KRH35529	Soybean	cytosol	41.28	50.99
KRG91288	Soybean	cytosol	41.28	50.99
CDY10103	Canola	extracellular	26.05	48.33
Bra032465.1-P	Field mustard	cytosol	39.48	47.36
CDY59787	Canola	cytosol	39.28	47.12
AT1G05370.1	Thale cress	cytosol	39.28	47.0
Bra015421.1-P	Field mustard	cytosol	37.68	46.77
CDY10026	Canola	cytosol	38.88	46.63
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	28.86	45.28
Bra039949.1-P	Field mustard	cytosol	35.67	44.39
AT3G22410.1	Thale cress	cytosol	34.47	43.0
Bra023828.1-P	Field mustard	nucleus	34.87	42.96
CDY38325	Canola	cytosol	28.46	38.27
CDY10638	Canola	nucleus	23.85	31.65
HORVU4Hr1G005090.2	Barley	cytosol	6.01	23.08
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	6.41	23.02
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	6.61	21.15
HORVU5Hr1G020290.3	Barley	plastid	6.41	20.91
HORVU4Hr1G074380.1	Barley	cytosol	5.81	20.86
HORVU5Hr1G122080.1	Barley	cytosol	9.82	19.84
HORVU5Hr1G121940.5	Barley	cytosol	9.82	19.68
HORVU5Hr1G114590.3	Barley	mitochondrion	4.81	19.67
HORVU7Hr1G021120.1	Barley	cytosol	11.02	19.5
HORVU4Hr1G009210.2	Barley	cytosol	11.02	18.84
HORVU4Hr1G009310.1	Barley	cytosol	11.02	18.84
HORVU4Hr1G009190.1	Barley	cytosol	10.82	18.49
HORVU3Hr1G096280.6	Barley	plastid	11.22	18.18
HORVU3Hr1G037050.3	Barley	nucleus	10.42	16.0
HORVU0Hr1G022240.10	Barley	mitochondrion	8.22	15.65
HORVU5Hr1G121860.2	Barley	plastid	10.42	15.38
HORVU3Hr1G096290.4	Barley	plastid	10.82	15.34
HORVU6Hr1G075070.1	Barley	nucleus	11.82	14.64

Protein Annotations

EnsemblPlants:HORVU4Hr1G067410.4	EnsemblPlantsGene:HORVU4Hr1G067410	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:IPR001251
InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650	PFscan:PS50191	SEG:seg
SMART:SM00516	SUPFAM:SSF52087	UniParc:UPI000B46F9B5	UniProt:A0A287PG49	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr4H:-:559316683..559319854

Molecular Weight (calculated)

54396.5 Da

IEP (calculated)

10.821

GRAVY (calculated)

-0.455

Length

499 amino acids

Sequence
(BLAST)

001: QPLPASLILS QSQPLRPPPP PPAVLTAVRS RSSVSACLAR LSRRHGEGRC HGHGEGGRQG PGEDRGRPQA DAQAGAALPQ AGGVLQRRVR GAVPPGAGRQ
101: REEGGQDPAG RPVLEGGHRS SGADHIIADE FSGELSEGMA YVAGHDDENR PVLMFKIKQD DYPKYQPQKS FVRFLVFTLE VAVASMNRFV DQFVLLFDAS
201: FFRSASAFLN LLMGTLKIVA DYYPGRLHRA FVIDPPSLFS VMWKGVRPFV ELAPATATVC SLDFEDSLED ASFTAYPRTA SLRFEPSVLT AGKAAGGGAV
301: GSASSRFAFS VSDNALKPWY LSTTPAPGPR SVVPTSSSPS LVGASPLSAR SFSFASPAAR STPPVQQQQQ PRAARAPPTP AAAKGGHKTP SPLPQQQFPR
401: TPRPSFLQSP FTFRKDGQAS RVERERESFL PFLRFYRRPY DEITYRAMMR RPLGGLIAIV AEDFRPASAQ QPLRRHAGAL HHQQHHHHHQ HHQHQHQRI

Best Arabidopsis Sequence Match ( AT1G05370.1 )
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.