Factsheet for TraesCS4B01G243300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G242900.1	Wheat	cytosol	96.9	97.55
TraesCS4A01G065900.1	Wheat	cytosol	97.12	95.64
Os03t0219100-01	Rice	cytosol	75.44	77.85
EER95261	Sorghum	cytosol	74.34	75.68
Zm00001d048066_P001	Maize	cytosol	71.68	74.14
Zm00001d028231_P003	Maize	cytosol	73.01	73.01
HORVU4Hr1G067410.4	Barley	plastid	78.98	71.54
GSMUA_Achr3P29630_001	Banana	cytosol	62.39	65.89
GSMUA_Achr7P27040_001	Banana	cytosol	62.17	64.6
GSMUA_Achr6P25200_001	Banana	cytosol	59.29	62.91
VIT_05s0020g03350.t01	Wine grape	cytosol	53.98	57.68
GSMUA_Achr5P08620_001	Banana	nucleus	57.96	56.47
PGSC0003DMT400077340	Potato	cytosol	52.65	56.26
KRH35529	Soybean	cytosol	50.0	55.94
Solyc09g075970.2.1	Tomato	cytosol	52.21	55.79
KRG91288	Soybean	cytosol	49.34	55.2
Bra032465.1-P	Field mustard	cytosol	47.57	51.68
CDY59787	Canola	cytosol	47.35	51.44
AT1G05370.1	Thale cress	cytosol	47.12	51.08
CDY10026	Canola	cytosol	46.9	50.96
CDY64658	Canola	cytosol	38.05	50.44
Bra015421.1-P	Field mustard	cytosol	44.69	50.25
Bra039949.1-P	Field mustard	cytosol	44.03	49.63
AT3G22410.1	Thale cress	cytosol	43.14	48.75
Bra023828.1-P	Field mustard	nucleus	42.48	47.41
CDY10103	Canola	extracellular	28.1	47.21
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	31.42	44.65
CDY38325	Canola	cytosol	36.06	43.94
CDY10638	Canola	nucleus	30.97	37.23
TraesCS3B01G475000.1	Wheat	cytosol	13.72	25.2
TraesCS3B01G475100.1	Wheat	cytosol	13.27	25.1
TraesCS5B01G552400.1	Wheat	cytosol	13.05	24.08
TraesCS5B01G551900.1	Wheat	cytosol	13.5	23.92
TraesCS4B01G055000.1	Wheat	cytosol	15.27	23.63
TraesCS5B01G552100.1	Wheat	cytosol	12.61	23.55
TraesCS5B01G552300.1	Wheat	cytosol	12.61	23.55
TraesCS5B01G451100.1	Wheat	cytosol	12.83	23.2
TraesCS4B01G055100.1	Wheat	cytosol	14.16	22.61
TraesCS4B01G055200.1	Wheat	cytosol	14.6	22.6
TraesCS5B01G552200.1	Wheat	cytosol	12.61	22.35
TraesCS3B01G502500.1	Wheat	cytosol, nucleus, plastid	13.5	21.86
TraesCS3B01G500500.1	Wheat	cytosol, nucleus, plastid	13.27	21.51
TraesCS3B01G211200.1	Wheat	nucleus	13.94	20.86
TraesCS7B01G089700.1	Wheat	cytosol	13.05	20.85
TraesCS6B01G331400.1	Wheat	nucleus	15.04	16.87
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	10.62	15.69

Protein Annotations

EnsemblPlants:TraesCS4B01G243300.1	EnsemblPlantsGene:TraesCS4B01G243300	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650	PFscan:PS50191
SEG:seg	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.2

Description

No Description!

Coordinates

chr4B:-:504181043..504184006

Molecular Weight (calculated)

50181.0 Da

IEP (calculated)

10.525

GRAVY (calculated)

-0.344

Length

452 amino acids

Sequence
(BLAST)

001: MAKVAAMAME KVDAKDREKI EAVRKVMRKQ APLSPKQAEY CNDACVERFL RAKGDNVKKA AKTLRAVLSW RETIGADHII ADEFSGELSE GMAYVAGHDD
101: DNRPVLMFKI KQDDYPKYQP QKSFVRFLVF TLEVAVASMN RFVDQFVLLF DASFFRSASA FLNLLMGTLK IVADYYPGRL HRAFVTDPPS LFSVMWKGVR
201: PFVDLAPATA VVSSLDFEDS LEDASFTAYP RTASLRFEPS VAAVLTAGGK AAGAVGSASS RFAFSVSDNA LKPWYLSTTP APGPRSVVPA SSSPSLVGAS
301: PLSARSFSFA SPAARSTPTP VQQQQPRAAR APPTPSAAKG GQKTPSPLPP QQQQQFPRTP RPSFLQSPFT FRKDGQASRV ERERESFLPF LRFYRRPYDE
401: ITYRAMMRRP LGGLIAIVAE DFRPMSAQQP LRRHAGALHH QHHHHQHQHQ RI

Best Arabidopsis Sequence Match ( AT1G05370.1 )
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.