Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G552100.1 | Wheat | cytosol | 70.0 | 72.31 |
| TraesCS5B01G551900.1 | Wheat | cytosol | 73.6 | 72.16 |
| TraesCS5B01G552300.1 | Wheat | cytosol | 68.4 | 70.66 |
| Os03t0850700-01 | Rice | cytosol | 72.0 | 68.97 |
| TraesCS5B01G552200.1 | Wheat | cytosol | 70.0 | 68.63 |
| TraesCS5B01G552400.1 | Wheat | cytosol | 67.2 | 68.57 |
| EER90511 | Sorghum | cytosol | 65.2 | 65.2 |
| Zm00001d012847_P001 | Maize | cytosol | 64.8 | 58.7 |
| TraesCS3B01G475000.1 | Wheat | cytosol | 52.4 | 53.25 |
| TraesCS3B01G475100.1 | Wheat | cytosol | 50.8 | 53.14 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 50.4 | 51.22 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 52.8 | 50.19 |
| Bra032645.1-P | Field mustard | cytosol | 43.6 | 47.19 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 47.2 | 46.09 |
| KRH41051 | Soybean | cytosol | 45.6 | 45.97 |
| AT1G01630.1 | Thale cress | cytosol | 46.4 | 45.49 |
| CDX90047 | Canola | cytosol | 46.4 | 45.49 |
| Bra033247.1-P | Field mustard | cytosol | 46.4 | 45.49 |
| CDY15164 | Canola | cytosol | 46.0 | 45.1 |
| KRH54081 | Soybean | cytosol | 46.4 | 43.77 |
| KRH63881 | Soybean | cytosol | 45.6 | 43.18 |
| Solyc03g118150.2.1 | Tomato | cytosol | 46.8 | 43.17 |
| PGSC0003DMT400036745 | Potato | cytosol | 46.0 | 42.44 |
| CDY38020 | Canola | cytosol | 44.4 | 42.37 |
| Solyc06g068800.2.1 | Tomato | cytosol | 46.8 | 37.86 |
| PGSC0003DMT400065724 | Potato | cytosol | 46.4 | 37.54 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 42.0 | 36.71 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 27.2 | 23.29 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 24.8 | 21.91 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 24.8 | 21.91 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 25.2 | 21.58 |
| TraesCS3B01G211200.1 | Wheat | nucleus | 25.2 | 20.86 |
| TraesCS3B01G502500.1 | Wheat | cytosol, nucleus, plastid | 21.6 | 19.35 |
| TraesCS3B01G500500.1 | Wheat | cytosol, nucleus, plastid | 21.6 | 19.35 |
| TraesCS7B01G361800.2 | Wheat | mitochondrion, plastid | 22.0 | 17.97 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 25.2 | 15.63 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 23.2 | 12.83 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G451100.1 | EnsemblPlantsGene:TraesCS5B01G451100 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | PFAM:PF00650 |
| PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | TIGR:cd00170 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:622623916..622626514
Molecular Weight (calculated)
28929.5 Da
IEP (calculated)
5.777
GRAVY (calculated)
-0.426
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGADEQNG GDAAEWKKVA DLRVVVEAQD PAAKEEDDFA LWRFLRARDH NIDKASAMLL KYLSWKRTTK PRGFITDYEV QGELVQEKLY MQGLDKKGRP
101: LVYLFLARHF PAKRDLDEFK RYAIYILDNT CTRLHAGQEK FAVVADLRGW GYANCDIRAY VAALDIMQSY YPERLGRVLL IHVPYVFMAA WKMLYPFIDD
201: KTKEKFVFVA DRDLDATFRD SIDESQLPEV YGGMLELRGY NDLSPPSSSN
101: LVYLFLARHF PAKRDLDEFK RYAIYILDNT CTRLHAGQEK FAVVADLRGW GYANCDIRAY VAALDIMQSY YPERLGRVLL IHVPYVFMAA WKMLYPFIDD
201: KTKEKFVFVA DRDLDATFRD SIDESQLPEV YGGMLELRGY NDLSPPSSSN
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.