Factsheet for TraesCS3B01G500500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G502500.1	Wheat	cytosol, nucleus, plastid	96.06	96.06
TraesCS3D01G453300.2	Wheat	cytosol, mitochondrion, nucleus, plastid	92.83	92.83
TraesCS7A01G094800.2	Wheat	cytosol	85.66	84.75
HORVU7Hr1G021120.1	Barley	cytosol	84.59	83.69
TraesCS4A01G395100.1	Wheat	cytosol	83.51	82.92
Os05t0267800-01	Rice	cytosol	60.22	59.36
EES17948	Sorghum	cytosol	55.56	57.41
KXG23351	Sorghum	cytosol	58.42	56.99
Zm00001d037794_P001	Maize	cytosol, mitochondrion, nucleus, plastid	57.71	54.95
OQU79005	Sorghum	cytosol	56.99	53.54
Zm00001d010499_P001	Maize	plastid	51.61	50.17
TraesCS3B01G211200.1	Wheat	nucleus	45.16	41.72
GSMUA_Achr8P01630_001	Banana	cytosol	44.44	35.63
Zm00001d019055_P001	Maize	cytosol	19.71	34.59
GSMUA_Achr10P...	Banana	nucleus	45.16	33.07
TraesCS4B01G055000.1	Wheat	cytosol	33.33	31.85
TraesCS4B01G055200.1	Wheat	cytosol	32.62	31.16
TraesCS4B01G055100.1	Wheat	cytosol	31.54	31.1
GSMUA_Achr9P17070_001	Banana	cytosol	44.8	30.19
TraesCS7B01G089700.1	Wheat	cytosol	29.03	28.62
TraesCS6B01G331400.1	Wheat	nucleus	40.86	28.29
TraesCS3B01G475000.1	Wheat	cytosol	21.15	23.98
TraesCS3B01G475100.1	Wheat	cytosol	19.71	23.01
TraesCS5B01G552300.1	Wheat	cytosol	19.35	22.31
TraesCS5B01G552200.1	Wheat	cytosol	20.07	21.96
TraesCS5B01G552100.1	Wheat	cytosol	19.0	21.9
TraesCS5B01G451100.1	Wheat	cytosol	19.35	21.6
TraesCS5B01G551900.1	Wheat	cytosol	19.35	21.18
TraesCS5B01G552400.1	Wheat	cytosol	17.92	20.41
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	18.64	16.99
TraesCS4B01G243300.1	Wheat	cytosol	21.51	13.27

Protein Annotations

EnsemblPlants:TraesCS3B01G500500.1	EnsemblPlantsGene:TraesCS3B01G500500	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF143	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
TIGR:cd00170	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:744625440..744633396

Molecular Weight (calculated)

32446.9 Da

IEP (calculated)

9.065

GRAVY (calculated)

-0.480

Length

279 amino acids

Sequence
(BLAST)

001: MSYQLMKKAR SEATQQKASS LSLEQQHEKI NEVRVLLGSL TKEMPSFLSD ATIRRFLRAR NWSMEQATKG LKETVKWRRE YRPDAISWED LAEMENEARR
101: THVADYLDKN GRSVLVVNLP MKSKVSVKEQ IKHLVYLLEY FATNSADEQD DYVVWLIDFR GWSISSTPFS TTRETMHIIQ NYYPGVIAVA IPFDPPKIFE
201: SFWKIAKNFV QPNMKEKVKF VYANKPESLE IIADIFDLDM LELSFGGRST SAIFDINKYA ERMIRADKMR VTSEDTNGK

Best Arabidopsis Sequence Match ( AT1G22180.2 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.