Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P01630_001 | Banana | cytosol | 57.97 | 68.97 |
| GSMUA_Achr10P... | Banana | nucleus | 58.21 | 63.25 |
| TraesCS3B01G211200.1 | Wheat | nucleus | 42.51 | 58.28 |
| Os01t0264700-01 | Rice | cytosol | 43.72 | 58.2 |
| TraesCS3D01G186000.2 | Wheat | nucleus | 42.27 | 57.76 |
| TraesCS3A01G181100.2 | Wheat | nucleus | 42.27 | 57.76 |
| EES02732 | Sorghum | cytosol | 42.51 | 55.7 |
| Zm00001d040360_P001 | Maize | cytosol | 42.51 | 55.7 |
| HORVU3Hr1G037050.3 | Barley | nucleus | 43.24 | 55.08 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 39.86 | 52.38 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 38.89 | 48.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.85 | 47.72 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 31.88 | 47.14 |
| Os05t0267800-01 | Rice | cytosol | 31.64 | 46.29 |
| TraesCS3D01G453300.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 31.16 | 46.24 |
| TraesCS3B01G502500.1 | Wheat | cytosol, nucleus, plastid | 30.68 | 45.52 |
| EES17948 | Sorghum | cytosol | 29.47 | 45.19 |
| Zm00001d037794_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 31.88 | 45.05 |
| TraesCS3B01G500500.1 | Wheat | cytosol, nucleus, plastid | 30.19 | 44.8 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 32.13 | 44.78 |
| KXG23351 | Sorghum | cytosol | 30.92 | 44.76 |
| HORVU7Hr1G021120.1 | Barley | cytosol | 30.43 | 44.68 |
| OQU79005 | Sorghum | cytosol | 31.88 | 44.44 |
| TraesCS7A01G094800.2 | Wheat | cytosol | 30.19 | 44.33 |
| TraesCS4A01G395100.1 | Wheat | cytosol | 29.95 | 44.13 |
| TraesCS7D01G090800.1 | Wheat | cytosol | 28.99 | 42.4 |
| Zm00001d010499_P001 | Maize | plastid | 28.26 | 40.77 |
| Zm00001d019055_P001 | Maize | cytosol | 9.9 | 25.79 |
| GSMUA_Achr8P00480_001 | Banana | cytosol | 13.53 | 25.0 |
| GSMUA_Achr11P... | Banana | cytosol | 14.25 | 23.98 |
| GSMUA_Achr3P14480_001 | Banana | mitochondrion | 13.53 | 21.37 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 12.8 | 20.15 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 16.43 | 15.96 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 16.18 | 15.65 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 16.18 | 15.4 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 17.15 | 15.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P17070_001 | EnsemblPlants:GSMUA_Achr9T17070_001 | EnsemblPlantsGene:GSMUA_Achr9G17070_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 |
| PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | SEG:seg | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000296010A | UniProt:M0U114 | MapMan:35.2 | : |
Description
CRAL/TRIO domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G17070_001]
Coordinates
chr9:-:11608743..11611585
Molecular Weight (calculated)
47198.0 Da
IEP (calculated)
6.197
GRAVY (calculated)
-0.401
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIPLGTNPV PSMNHVSSTV HVDHYGSSWS LCLLQLVNCV SMNIVKSKGN GIEKSLSIEE QKAKINEVRE ILGAMVNMLP NFCSDASVSR YLRARNWNVE
101: RASKMLKESL KWRLEYKPET IRWEDVAHEA ETGKIYRADY LDKNGRAVLV MRPGFQNTSS SKGQIRYLVY CMENAIFNLA ANQEQMVWLI DFQGWTMASV
201: SVKVTRETAH ILQDYYPERL GLGILYNPPR IFESFWKVVK PFLEHKTYRK VKFVYSDNTE SQKIMTDLFE MDKLESAFGG HNPAGFDLNK YAEKMKEDDQ
301: KMSAFMESAS SVFFQEQSHV SVLQPEFSVT EHQLESSSDS SPSSDAESPR RVDTKISSAD EMKEQLNCKD TTIAESGFFS YKVPCFVEQR FEHGIVLCTY
401: SAFANLCSSE TTSL
101: RASKMLKESL KWRLEYKPET IRWEDVAHEA ETGKIYRADY LDKNGRAVLV MRPGFQNTSS SKGQIRYLVY CMENAIFNLA ANQEQMVWLI DFQGWTMASV
201: SVKVTRETAH ILQDYYPERL GLGILYNPPR IFESFWKVVK PFLEHKTYRK VKFVYSDNTE SQKIMTDLFE MDKLESAFGG HNPAGFDLNK YAEKMKEDDQ
301: KMSAFMESAS SVFFQEQSHV SVLQPEFSVT EHQLESSSDS SPSSDAESPR RVDTKISSAD EMKEQLNCKD TTIAESGFFS YKVPCFVEQR FEHGIVLCTY
401: SAFANLCSSE TTSL
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.