CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010499_P001	Maize	plastid	69.63	65.51
KXG23351	Sorghum	cytosol	67.41	63.64
Os05t0267800-01	Rice	cytosol	63.33	60.42
OQU79005	Sorghum	cytosol	62.96	57.24
HORVU7Hr1G021120.1	Barley	cytosol	59.26	56.74
TraesCS7D01G090800.1	Wheat	cytosol	58.89	56.18
TraesCS3B01G502500.1	Wheat	cytosol, nucleus, plastid	57.78	55.91
TraesCS3D01G453300.2	Wheat	cytosol, mitochondrion, nucleus, plastid	57.41	55.56
TraesCS3B01G500500.1	Wheat	cytosol, nucleus, plastid	57.41	55.56
TraesCS4A01G395100.1	Wheat	cytosol	57.78	55.52
TraesCS7A01G094800.2	Wheat	cytosol	57.04	54.61
Zm00001d019055_P001	Maize	cytosol	23.7	40.25
EES02732	Sorghum	cytosol	43.7	37.34
GSMUA_Achr8P01630_001	Banana	cytosol	44.81	34.77
EER93541	Sorghum	cytosol	35.56	32.32
GSMUA_Achr10P...	Banana	nucleus	44.07	31.23
KXG37682	Sorghum	cytosol	33.7	31.06
KXG37681	Sorghum	cytosol	35.19	30.74
GSMUA_Achr9P17070_001	Banana	cytosol	45.19	29.47
EES05517	Sorghum	cytosol	35.93	27.71
EES02004	Sorghum	cytosol	20.74	22.76
EER90511	Sorghum	cytosol	20.0	21.6
EES02002	Sorghum	cytosol	20.0	21.18
KXG19106	Sorghum	plastid	16.67	17.58
EER95261	Sorghum	cytosol	17.41	10.59

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:8058313	UniProt:C5YVC5	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlants:EES17948	ProteinID:EES17948	ProteinID:EES17948.1	InterPro:IPR001251
InterPro:IPR036865	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF143	SMART:SM00516
SMART:SM01100	EnsemblPlantsGene:SORBI_3009G090800	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0001A88ACB	RefSeq:XP_002439518.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:17758872..17784486

Molecular Weight (calculated)

31348.7 Da

IEP (calculated)

8.819

GRAVY (calculated)

-0.502

Length

270 amino acids

Sequence
(BLAST)

001: MSNLLKSKSD PKLKKQASSS HEQQAKINEV RELLGDLPTE MPGFLTDSTI RRFLRTRNWS TVQATKALKE TVKWRRQYRP DKIRWEDIAE TEQLLKKMYI
101: ADYLDKNGRT VFVAMPSIKS LVPAKEQVKL LVYNLESCTM SSENAQENVV WVVDFSGWTV SSTPLAESRQ SVHIIQNYYP GLIDVAILCN PPKMFESFWK
201: ILNYFIEPEV KEKVKFVYTN DSECQRIMAD MFDLDKLESA FGGCNTSGID IVKYSERMQR RDQTRNLHIP

Best Arabidopsis Sequence Match ( AT1G22180.2 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.