Factsheet for GSMUA_Achr10P05150_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P01630_001	Banana	cytosol	69.29	75.86
TraesCS3B01G211200.1	Wheat	nucleus	46.98	59.27
TraesCS3A01G181100.2	Wheat	nucleus	46.98	59.08
TraesCS3D01G186000.2	Wheat	nucleus	46.72	58.75
GSMUA_Achr9P17070_001	Banana	cytosol	63.25	58.21
EES02732	Sorghum	cytosol	46.46	56.01
Os01t0264700-01	Rice	cytosol	45.67	55.95
HORVU3Hr1G037050.3	Barley	nucleus	47.24	55.38
Zm00001d040360_P001	Maize	cytosol	45.67	55.06
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	43.57	52.7
GSMUA_Achr4P03190_001	Banana	cytosol	36.48	49.64
GSMUA_Achr3P04420_001	Banana	cytosol	42.52	48.5
GSMUA_AchrUn_...	Banana	cytosol	35.7	47.72
TraesCS3D01G453300.2	Wheat	cytosol, mitochondrion, nucleus, plastid	34.38	46.95
TraesCS3B01G502500.1	Wheat	cytosol, nucleus, plastid	34.12	46.59
GSMUA_Achr8P26360_001	Banana	cytosol	35.7	45.79
TraesCS3B01G500500.1	Wheat	cytosol, nucleus, plastid	33.07	45.16
HORVU7Hr1G021120.1	Barley	cytosol	33.33	45.04
TraesCS4A01G395100.1	Wheat	cytosol	33.07	44.84
TraesCS7A01G094800.2	Wheat	cytosol	33.07	44.68
Os05t0267800-01	Rice	cytosol	32.81	44.17
EES17948	Sorghum	cytosol	31.23	44.07
TraesCS7D01G090800.1	Wheat	cytosol	32.55	43.82
Zm00001d037794_P001	Maize	cytosol, mitochondrion, nucleus, plastid	33.6	43.69
KXG23351	Sorghum	cytosol	32.02	42.66
OQU79005	Sorghum	cytosol	33.07	42.42
Zm00001d010499_P001	Maize	plastid	29.13	38.68
Zm00001d019055_P001	Maize	cytosol	12.07	28.93
GSMUA_Achr11P...	Banana	cytosol	15.75	24.39
GSMUA_Achr8P00480_001	Banana	cytosol	13.91	23.66
GSMUA_Achr3P14480_001	Banana	mitochondrion	14.44	20.99
GSMUA_Achr4P15920_001	Banana	cytosol	14.17	20.53
GSMUA_Achr6P25200_001	Banana	cytosol	19.16	17.14
GSMUA_Achr3P29630_001	Banana	cytosol	18.11	16.12
GSMUA_Achr5P08620_001	Banana	nucleus	18.9	15.52
GSMUA_Achr7P27040_001	Banana	cytosol	17.59	15.4

Protein Annotations

EnsemblPlants:GSMUA_Achr10P05150_001	EnsemblPlants:GSMUA_Achr10T05150_001	EnsemblPlantsGene:GSMUA_Achr10G05150_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF202
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002965844	UniProt:M0RFJ2	MapMan:35.2	:

Description

CRAL/TRIO domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G05150_001]

Coordinates

chr10:-:14839168..14848864

Molecular Weight (calculated)

43562.7 Da

IEP (calculated)

8.521

GRAVY (calculated)

-0.578

Length

381 amino acids

Sequence
(BLAST)

001: MYLRKPRASS AEKALSYQEQ QTKINEVRCL LGQLAERLPN FCSDASILRY LRARNWDVQK SGKMLKETLK WRLECKPETI RWEDVVHEAE TGKIYRANYL
101: DKYGRAVLVM RPGFQNTSSA KGQIKYLVYC MENAILNLAA DQEQMVWLID FQGWTMASTS VQATRETARV LQDYYPERLA LGILYNPPRI FESFSKVVKP
201: FVDQKTYKKV KFVYSDDAES QKIMTDLFDI DKLESAFGGH NQDGFDISSY AEQMKEDDKK MSDFLNSGGS VLSKEPSLLS ILQKPEPSTS EALSQGSSDS
301: FSSGDEESPR SLHVKNSNQN LTAPQVNRSD SGAAKSEAQH ELMIQMREWG ERKNVWAARF RNIRPVRTGL IVQFTYVPFL G

Best Arabidopsis Sequence Match ( AT1G22180.4 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.