Factsheet for GSMUA_Achr11P19620_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P24290_001
GSMUA_Achr3P00280_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	GSMUA_Achr1P24290_001	AT3G54850.1	21798944
AT1G01630.1	GSMUA_Achr3P00280_001	AT3G54850.1	21798944
AT1G01630.1	GSMUA_AchrUn_...	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00480_001	Banana	cytosol	63.01	69.2
GSMUA_Achr4P15920_001	Banana	cytosol	68.29	63.88
Bra032645.1-P	Field mustard	cytosol	56.5	60.17
Bra033247.1-P	Field mustard	cytosol	60.16	58.04
CDX90047	Canola	cytosol	60.16	58.04
CDY15164	Canola	cytosol	59.76	57.65
AT1G01630.1	Thale cress	cytosol	59.35	57.25
VIT_01s0150g00170.t01	Wine grape	cytosol	56.5	56.5
VIT_17s0000g00130.t01	Wine grape	cytosol	58.13	55.86
KRH54081	Soybean	cytosol	59.76	55.47
KRH41051	Soybean	cytosol	55.69	55.24
CDY38020	Canola	cytosol	58.54	54.96
KRH63881	Soybean	cytosol	58.54	54.55
Solyc03g118150.2.1	Tomato	cytosol	55.69	50.55
PGSC0003DMT400036745	Potato	cytosol	55.69	50.55
KRH59732	Soybean	endoplasmic reticulum, golgi	51.22	44.06
PGSC0003DMT400065724	Potato	cytosol	54.88	43.69
Solyc06g068800.2.1	Tomato	cytosol	54.06	43.04
GSMUA_Achr4P03190_001	Banana	cytosol	30.49	26.79
GSMUA_AchrUn_...	Banana	cytosol	30.89	26.67
GSMUA_Achr8P26360_001	Banana	cytosol	29.27	24.24
GSMUA_Achr3P14480_001	Banana	mitochondrion	21.54	20.23
GSMUA_Achr3P04420_001	Banana	cytosol	27.24	20.06
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	23.98	18.73
GSMUA_Achr8P01630_001	Banana	cytosol	24.8	17.53
GSMUA_Achr10P...	Banana	nucleus	24.39	15.75
GSMUA_Achr9P17070_001	Banana	cytosol	23.98	14.25
GSMUA_Achr3P29630_001	Banana	cytosol	23.58	13.55
GSMUA_Achr6P25200_001	Banana	cytosol	23.17	13.38
GSMUA_Achr7P27040_001	Banana	cytosol	23.17	13.1
GSMUA_Achr5P08620_001	Banana	nucleus	21.54	11.42

Protein Annotations

EnsemblPlants:GSMUA_Achr11P19620_001	EnsemblPlants:GSMUA_Achr11T19620_001	EnsemblPlantsGene:GSMUA_Achr11G19620_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF198
PFAM:PF00650	PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0002953D98	UniProt:M0RTP2	MapMan:35.1	:	:	:

Description

Putative Random slug protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr11G19620_001]

Coordinates

chr11:-:20709068..20712845

Molecular Weight (calculated)

28514.6 Da

IEP (calculated)

6.160

GRAVY (calculated)

-0.306

Length

246 amino acids

Sequence
(BLAST)

001: MELEGNQQLP GSDDVEKKKV ASLRALVEGQ VPAAKEVDDL MLRRFLRARN LDVEKASALF LKYLEWRCTA VPNGFISETE IKNELSHKEV FTQGFDKLGR
101: PIVVYHPAKH FCSNREMDEL KRFVVYILDK LCARMPTDQE KFTCIADLNG WGYSNCDIRG YLASLDILQN RYPERLGKAY LIHVPYIFMK VWKILYQFLD
201: KNTKEKFIFI ENKDLKATLL EEIDESQLPE IYGGKLPLVP VEESTI

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.