Factsheet for PGSC0003DMT400065724

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g068800.2.1	Tomato	cytosol	95.47	95.47
PGSC0003DMT400036745	Potato	cytosol	64.4	73.43
KRH41051	Soybean	cytosol	49.51	61.69
GSMUA_Achr8P00480_001	Banana	cytosol	44.01	60.71
KRH54081	Soybean	cytosol	50.81	59.25
VIT_17s0000g00130.t01	Wine grape	cytosol	48.22	58.2
KRH63881	Soybean	cytosol	49.19	57.58
GSMUA_Achr11P...	Banana	cytosol	43.69	54.88
GSMUA_Achr4P15920_001	Banana	cytosol	45.63	53.61
TraesCS4A01G333500.1	Wheat	cytosol	38.19	50.21
EER90511	Sorghum	cytosol	39.48	48.8
TraesCS5B01G552300.1	Wheat	cytosol	38.19	48.76
KRH59732	Soybean	endoplasmic reticulum, golgi	44.98	48.6
Os03t0850700-01	Rice	cytosol	40.78	48.28
TraesCS5B01G552100.1	Wheat	cytosol	37.54	47.93
TraesCS5D01G538300.1	Wheat	cytosol	39.48	47.84
HORVU5Hr1G121940.5	Barley	cytosol	38.51	47.79
TraesCS5D01G538500.1	Wheat	cytosol	37.86	47.76
TraesCS5D01G538600.1	Wheat	cytosol	37.22	47.52
Zm00001d042274_P001	Maize	cytosol	38.51	47.41
TraesCS5B01G552400.1	Wheat	cytosol	37.54	47.35
EES02004	Sorghum	cytosol	37.54	47.15
TraesCS3A01G440900.1	Wheat	cytosol	37.54	47.15
TraesCS5B01G551900.1	Wheat	cytosol	38.84	47.06
TraesCS3B01G475000.1	Wheat	cytosol	37.22	46.75
TraesCS5B01G451100.1	Wheat	cytosol	37.54	46.4
TraesCS5B01G552200.1	Wheat	cytosol	38.19	46.27
TraesCS4A01G333800.1	Wheat	cytosol	38.19	46.27
TraesCS3D01G433700.1	Wheat	cytosol	36.89	45.78
HORVU5Hr1G122080.1	Barley	cytosol	36.25	45.34
Zm00001d042275_P001	Maize	cytosol	36.57	45.02
EES02002	Sorghum	cytosol	36.89	44.71
Os01t0926800-01	Rice	cytosol, mitochondrion	35.28	44.13
Zm00001d012847_P001	Maize	cytosol	39.16	43.84
TraesCS3A01G441100.2	Wheat	cytosol	33.66	43.33
TraesCS3B01G475100.1	Wheat	cytosol	33.01	42.68
TraesCS3A01G441000.1	Wheat	cytosol	33.66	42.62
TraesCS3D01G433800.1	Wheat	cytosol	32.69	42.08
TraesCS5D01G538700.1	Wheat	cytosol	38.84	37.97
PGSC0003DMT400058687	Potato	cytosol	29.13	37.5
PGSC0003DMT400058639	Potato	cytosol	22.98	34.98
HORVU5Hr1G121860.2	Barley	plastid	38.19	34.91
PGSC0003DMT400058685	Potato	cytosol	22.65	34.83
HORVU3Hr1G096280.6	Barley	plastid	33.66	33.77
HORVU3Hr1G096290.4	Barley	plastid	36.57	32.1
PGSC0003DMT400058682	Potato	cytosol	29.13	31.8
Zm00001d009968_P001	Maize	cytosol	22.65	22.44
PGSC0003DMT400013200	Potato	cytosol	20.71	22.3
PGSC0003DMT400038571	Potato	cytosol	19.09	22.01
Zm00001d034765_P001	Maize	cytosol	20.06	21.75
PGSC0003DMT400024527	Potato	cytosol	21.04	19.7
PGSC0003DMT400046785	Potato	mitochondrion	15.86	18.7
PGSC0003DMT400018571	Potato	cytosol	19.42	18.35
PGSC0003DMT400077340	Potato	cytosol	19.74	14.42

Protein Annotations

EntrezGene:102589873	Gene3D:3.40.525.10	MapMan:35.2	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	UniProt:M1CEH6	PFAM:PF00650	EnsemblPlantsGene:PGSC0003DMG400025577
PGSC:PGSC0003DMG400025577	EnsemblPlants:PGSC0003DMT400065724	PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF198	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002968824	RefSeq:XP_006366291.1	SEG:seg

Description

Polyphosphoinositide binding protein Ssh2p [Source:PGSC_GENE;Acc:PGSC0003DMG400025577]

Coordinates

chr6:+:50445156..50448637

Molecular Weight (calculated)

35391.9 Da

IEP (calculated)

6.315

GRAVY (calculated)

-0.438

Length

309 amino acids

Sequence
(BLAST)

001: MEGKAEAVTM KPTNDELLSK QIMRQEAAAT EKQEIQMRCD DAMKPNDDEL LSKQRMKQEA VATEKQGIQM QCDDTITDQE MNKIELMRAL VEKQDPSSKE
101: VDDYALRRFL RARDLDIEKS AAMFLKYLKW RQSFVPKGSI SVSEIPNEIA QNKMFMQGED KQGCPIAVVF GGRHIQNKLG GVEEFKRFIV FALDKLSART
201: SPGREKFTII GDLQNFGYCN SDVRAYLAAL SIVQDCYPER LGKVLLVHVP YIFCTLWKIL YPFIDNHTKK KIMFVENKRL TATLLQDIDE SQLPETYGGK
301: MQLVPIQDA

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.