Factsheet for TraesCS5D01G538700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G498700.1
TraesCS6A01G180500.1
TraesCS6A01G298800.1
TraesCS6B01G328200.1
TraesCS6D01G164600.1
TraesCS6D01G278500.1
TraesCS7A01G001900.1
TraesCS7A01G200700.1
TraesCS7B01G107500.1
TraesCS7D01G001600.2
TraesCS7D01G204000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	TraesCS6A01G298800.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6B01G328200.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6D01G278500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7A01G200700.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7B01G107500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7D01G204000.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS4A01G498700.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7A01G001900.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7D01G001600.2	AT3G54850.1	21798944
AT1G01630.1	TraesCS6A01G180500.1	AT4G32190.1	21798944
AT1G01630.1	TraesCS6D01G164600.1	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G552400.1	Wheat	cytosol	69.3	89.39
HORVU5Hr1G122080.1	Barley	cytosol	66.77	85.43
TraesCS5D01G538500.1	Wheat	cytosol	64.24	82.86
TraesCS5D01G538600.1	Wheat	cytosol	58.86	76.86
TraesCS5D01G538300.1	Wheat	cytosol	54.43	67.45
Os03t0850700-01	Rice	cytosol	53.48	64.75
EER90511	Sorghum	cytosol	50.63	64.0
Zm00001d012847_P001	Maize	cytosol	49.68	56.88
TraesCS3D01G433700.1	Wheat	cytosol	43.04	54.62
TraesCS3D01G433800.1	Wheat	cytosol	40.19	52.92
VIT_01s0150g00170.t01	Wine grape	cytosol	39.87	51.22
GSMUA_Achr4P15920_001	Banana	cytosol	42.09	50.57
Bra032645.1-P	Field mustard	cytosol	36.08	49.35
AT1G01630.1	Thale cress	cytosol	39.56	49.02
KRH41051	Soybean	cytosol	37.66	47.98
Bra033247.1-P	Field mustard	cytosol	38.29	47.45
CDX90047	Canola	cytosol	38.29	47.45
CDY15164	Canola	cytosol	37.97	47.06
VIT_17s0000g00130.t01	Wine grape	cytosol	37.97	46.88
KRH54081	Soybean	cytosol	38.92	46.42
KRH63881	Soybean	cytosol	37.97	45.45
PGSC0003DMT400036745	Potato	cytosol	38.29	44.65
Solyc03g118150.2.1	Tomato	cytosol	37.97	44.28
CDY38020	Canola	cytosol	36.39	43.89
Solyc06g068800.2.1	Tomato	cytosol	37.97	38.84
PGSC0003DMT400065724	Potato	cytosol	37.97	38.84
KRH59732	Soybean	endoplasmic reticulum, golgi	34.81	38.46
TraesCS4D01G055200.1	Wheat	cytosol	20.57	22.26
TraesCS3D01G186000.2	Wheat	nucleus	21.2	22.11
TraesCS4D01G055300.1	Wheat	cytosol	20.25	21.92
TraesCS4D01G055400.1	Wheat	cytosol	19.62	21.23
TraesCS4D01G055100.1	Wheat	cytosol	13.92	21.05
TraesCS7D01G090800.1	Wheat	cytosol	16.77	18.73
TraesCS3D01G453300.2	Wheat	cytosol, mitochondrion, nucleus, plastid	15.82	17.92
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	16.14	16.45
TraesCS6D01G281700.1	Wheat	nucleus	18.67	15.01
TraesCS4D01G242900.1	Wheat	cytosol	19.3	13.59

Protein Annotations

EnsemblPlants:TraesCS5D01G538700.1	EnsemblPlantsGene:TraesCS5D01G538700	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF158	PFAM:PF00650
PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
TIGR:cd00170	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:550637498..550639047

Molecular Weight (calculated)

36200.2 Da

IEP (calculated)

7.869

GRAVY (calculated)

-0.488

Length

316 amino acids

Sequence
(BLAST)

001: MDSAEEDTHG TDTCVHFSSC RQTATEHLTR SHSHVITVIT FIITCTGTPT HFSSYKNRPL SAQLTQSRAD RAPPLQEMDC GTDEHQHGHG DATEWKKVAE
101: LRAVAEAQDP AAKEEDDFAL RRFLRARDHN IGKASTMLLQ YLTWKRVAKP RGSISDDEVR NEIAKDRVRM QGFDRLNRPM AYLYGARHFP AHHDLGEFKR
201: YVAYVLDKIC TRLPVGQEKF AAVIDMKGWG YANCDLRGYV AALEIMQGYY PERLGRVFLI HVPYMFMAAW KMVYPFIDDR TRKKFVFVAN KDLKSTLQGA
301: IDESQLPEEY GCMLKL

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.