Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G017080.1 | |
| HORVU6Hr1G036020.1 | |
| HORVU7Hr1G000780.1 | |
| HORVU7Hr1G041170.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G552400.1 | Wheat | cytosol | 89.07 | 89.8 |
| HORVU5Hr1G121940.5 | Barley | cytosol | 82.59 | 81.93 |
| EER90511 | Sorghum | cytosol | 68.02 | 67.2 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 85.43 | 66.77 |
| Os03t0850700-01 | Rice | cytosol | 70.45 | 66.67 |
| Zm00001d012847_P001 | Maize | cytosol | 67.21 | 60.14 |
| HORVU5Hr1G121860.2 | Barley | plastid | 71.26 | 52.07 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 53.85 | 50.57 |
| Bra032645.1-P | Field mustard | cytosol | 46.56 | 49.78 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 48.99 | 49.19 |
| AT1G01630.1 | Thale cress | cytosol | 50.2 | 48.63 |
| Bra033247.1-P | Field mustard | cytosol | 48.58 | 47.06 |
| CDY15164 | Canola | cytosol | 48.58 | 47.06 |
| CDX90047 | Canola | cytosol | 48.58 | 47.06 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 47.77 | 46.09 |
| KRH54081 | Soybean | cytosol | 49.39 | 46.04 |
| KRH41051 | Soybean | cytosol | 46.15 | 45.97 |
| KRH63881 | Soybean | cytosol | 48.18 | 45.08 |
| CDY38020 | Canola | cytosol | 46.96 | 44.27 |
| HORVU3Hr1G096280.6 | Barley | plastid | 54.25 | 43.51 |
| Solyc03g118150.2.1 | Tomato | cytosol | 47.37 | 43.17 |
| PGSC0003DMT400036745 | Potato | cytosol | 47.37 | 43.17 |
| HORVU3Hr1G096290.4 | Barley | plastid | 53.85 | 37.78 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 42.51 | 36.71 |
| Solyc06g068800.2.1 | Tomato | cytosol | 45.34 | 36.25 |
| PGSC0003DMT400065724 | Potato | cytosol | 45.34 | 36.25 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 12.96 | 23.02 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 11.74 | 22.31 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 12.55 | 22.3 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 26.32 | 22.26 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 25.91 | 21.92 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 25.51 | 21.58 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 10.12 | 20.49 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 12.55 | 19.87 |
| HORVU3Hr1G037050.3 | Barley | nucleus | 25.91 | 19.69 |
| HORVU5Hr1G020290.3 | Barley | plastid | 12.15 | 19.61 |
| HORVU0Hr1G022240.10 | Barley | mitochondrion | 19.84 | 18.7 |
| HORVU7Hr1G021120.1 | Barley | cytosol | 19.84 | 17.38 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 23.08 | 14.14 |
| HORVU4Hr1G067410.4 | Barley | plastid | 19.84 | 9.82 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G122080.1 | EnsemblPlantsGene:HORVU5Hr1G122080 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | PFAM:PF00650 |
| PFscan:PS50191 | SEG:seg | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI0002959E57 | UniProt:M0XPS8 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:661217995..661219748
Molecular Weight (calculated)
28327.0 Da
IEP (calculated)
7.281
GRAVY (calculated)
-0.455
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCGTDDAHQ HGHGHGNDDG GDAAEWKKVA ELRAVVEAQD PAAKEEDDLA LRRFLRARDH NIGKASVMLL HYLAWKRVAK PHGSISDDEV RDEIAKDRVC
101: MEGFDRLNRP MAYLYGARHF PARRDLDGFK RYVIYVLDKI CTRLPVGQEK FAAVIDMRGW GYANCDIRGY VAALDIMQSY YPERLGRVFL IHVPYMFMAA
201: WKMVYPFIDD RTRKKFVFVA DKDLDPTLRG AIKESQLPEE YGGNLKL
101: MEGFDRLNRP MAYLYGARHF PARRDLDGFK RYVIYVLDKI CTRLPVGQEK FAAVIDMRGW GYANCDIRGY VAALDIMQSY YPERLGRVFL IHVPYMFMAA
201: WKMVYPFIDD RTRKKFVFVA DKDLDPTLRG AIKESQLPEE YGGNLKL
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.