Factsheet for HORVU7Hr1G000780.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G027080.4
HORVU1Hr1G027550.1
HORVU1Hr1G076110.1
HORVU3Hr1G026870.1
HORVU3Hr1G071240.2
HORVU5Hr1G095150.2
HORVU6Hr1G062870.1
HORVU7Hr1G000780.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54850.1	HORVU5Hr1G095150.2	AT1G04130.1	21798944
AT3G54850.1	HORVU0Hr1G027080.4	AT3G48150.1	21798944
AT3G54850.1	HORVU6Hr1G062870.1	AT3G48150.1	21798944
AT3G54850.1	HORVU7Hr1G000780.1	AT3G54850.1	21798944
AT3G54850.1	HORVU1Hr1G027550.1	AT4G39470.1	21798944
AT3G54850.1	HORVU1Hr1G076110.1	AT5G58950.1	21798944
AT3G54850.1	HORVU3Hr1G026870.1	AT5G58950.1	21798944
AT3G54850.1	HORVU3Hr1G071240.2	AT5G58950.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G001900.1	Wheat	cytosol	86.44	96.23
TraesCS7D01G001600.2	Wheat	cytosol, plastid	96.27	94.35
TraesCS4A01G498700.1	Wheat	plastid	93.9	87.52
Os06t0102700-01	Rice	plasma membrane	83.22	81.29
EER87680	Sorghum	cytosol	80.85	79.37
Zm00001d045632_P004	Maize	cytosol, mitochondrion	80.34	75.24
KRH04403	Soybean	mitochondrion	38.81	63.26
VIT_13s0019g04710.t01	Wine grape	cytosol	63.22	59.39
PGSC0003DMT400019235	Potato	cytosol	62.2	58.81
Solyc11g008390.1.1	Tomato	cytosol	61.86	58.49
KRH34817	Soybean	cytosol	60.85	56.8
KRG91959	Soybean	cytosol	60.51	56.58
GSMUA_Achr3P00280_001	Banana	cytosol	57.12	55.89
Bra007105.1-P	Field mustard	cytosol	58.47	54.42
AT3G54850.1	Thale cress	cytosol	58.14	54.27
CDX78273	Canola	cytosol	58.14	54.1
GSMUA_Achr1P24290_001	Banana	cytosol	54.24	52.37
HORVU5Hr1G021270.1	Barley	cytosol	54.58	47.21
HORVU5Hr1G021280.1	Barley	cytosol	54.58	46.8
HORVU4Hr1G059610.2	Barley	cytosol	51.69	39.51
CDX73439	Canola	plastid	58.47	38.29
HORVU7Hr1G121810.1	Barley	cytosol	40.17	36.97
HORVU7Hr1G061800.2	Barley	cytosol	39.66	36.34
HORVU7Hr1G038870.1	Barley	plastid	16.95	34.84
HORVU6Hr1G073280.1	Barley	cytosol	43.56	32.01
HORVU3Hr1G081380.1	Barley	cytosol	23.39	31.22
HORVU2Hr1G067610.6	Barley	cytosol	24.92	31.01
HORVU2Hr1G036080.15	Barley	plastid	21.19	27.29
HORVU3Hr1G113910.3	Barley	cytosol	36.44	25.66
HORVU1Hr1G069990.1	Barley	plastid	28.98	25.07
HORVU3Hr1G081300.1	Barley	plastid	29.15	25.0
HORVU6Hr1G041430.8	Barley	mitochondrion	31.86	22.82
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	25.59	21.54

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	UniProt:A0A287VBY0	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005102
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0070696	EnsemblPlantsGene:HORVU7Hr1G000780	EnsemblPlants:HORVU7Hr1G000780.1
InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564
PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF111	SMART:SM00185	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000B466DF8	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287VBY0]

Coordinates

chrchr7H:+:1309283..1315713

Molecular Weight (calculated)

63629.4 Da

IEP (calculated)

6.164

GRAVY (calculated)

-0.210

Length

590 amino acids

Sequence
(BLAST)

001: PEPRGPLRRL CGDLSRRVRL LAPLLDDPSA SASPPLADAL RAARDLLHSV HHGSKIYQAM RGRDSLLREF AAVNEQIQAA LDQLPYNDFD MPEEVQEQVA
101: LVHSQFKRAA TRAESADPQL ARDLAWALSD DKPSVPALLM RVSEKLQLET MTDMKRESVA LHEMVISSGG EPDGCVEEMS SLLKKLNDCV ITQAPAAGEA
201: PGMGRSPSVK SPIIPDEFRC PISLELMQDP VIVSSGQTYE RSCIQKWLDS GHKTCPKTQL ALTHTSLTPN FVLKSLIAQW CEANGIELPK NKANSHDKKA
301: VKSSDYDNAG LISLMNRLRA GNQDEQRAAA GEIRLLAKRN VNNRICIAEA GAIPLLVNLL SSSDPRTQEH AVTALLNLSI HENNKASIVD SNAIPKIVEV
401: LKTGSMEARE NAAATLFSLS VVDENKVTIG AAGAIPPLIN LLCDGSPRGK KDAATAIFNL CIYQGNKVRA VKAGIITHLM NFLVDPTGGM IDEALTLLSI
501: LAGNQEGKAV ITQSEPMPPL IEVVRTGSPR NRENAAAILL SLCSADAEQT MAAKVAGGED ALKELSETGT DRAKRKASSL LELMRQSEDA

Best Arabidopsis Sequence Match ( AT3G54850.1 )
(BLAST)

001: MGLTNCCSHE ELMSRLVDSV KEISGFSSSR GFIGKIQGDL VRRITLLSPF FEELIDVNVE LKKDQITGFE AMRIALDSSL ELFRSVNGGS KLFQLFDRDS
101: LVEKFRDMTV EIEAALSQIP YEKIEVSEEV REQVQLLHFQ FKRAKERWEE SDLQLSHDLA MAENVMDPDP IILKRLSQEL QLTTIDELKK ESHAIHEYFL
201: SYDGDPDDCF ERMSSLLKNL VDFVTMESSD PDPSTGSRIV SRHRSPVIPE YFRCPISLEL MKDPVIVSTG QTYERSSIQK WLDAGHKTCP KSQETLLHAG
301: LTPNYVLKSL IALWCESNGI ELPQNQGSCR TTKIGGSSSS DCDRTFVLSL LEKLANGTTE QQRAAAGELR LLAKRNVDNR VCIAEAGAIP LLVELLSSPD
401: PRTQEHSVTA LLNLSINEGN KGAIVDAGAI TDIVEVLKNG SMEARENAAA TLFSLSVIDE NKVAIGAAGA IQALISLLEE GTRRGKKDAA TAIFNLCIYQ
501: GNKSRAVKGG IVDPLTRLLK DAGGGMVDEA LAILAILSTN QEGKTAIAEA ESIPVLVEII RTGSPRNREN AAAILWYLCI GNIERLNVAR EVGADVALKE
601: LTENGTDRAK RKAASLLELI QQTEGVAVTT VP

Arabidopsis Description

PUB14U-box domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.