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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG91959
KRG99108
KRH04403
KRH08093
KRH13458
KRH13893
KRH13899
KRH19640
KRH21856
KRH24006
KRH27396
KRH27971
KRH28787
KRH29310
KRH32256
KRH34817
KRH43461
KRH45889
KRH53808
KRH64138
KRH69796
KRH76667
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G54850.1 KRH19640 AT1G04130.1 21798944
AT3G54850.1 KRH32256 AT1G04130.1 21798944
AT3G54850.1 KRH13458 AT1G53510.1 21798944
AT3G54850.1 KRH21856 AT1G53510.1 21798944
AT3G54850.1 KRG99108 AT1G69690.1 21798944
AT3G54850.1 KRH45889 AT1G69690.1 21798944
AT3G54850.1 KRH24006 AT3G48150.1 21798944
AT3G54850.1 KRH27971 AT3G48150.1 21798944
AT3G54850.1 KRH29310 AT3G48150.1 21798944
AT3G54850.1 KRH77487 AT3G48150.1 21798944
AT3G54850.1 KRG91959 AT3G54850.1 21798944
AT3G54850.1 KRH04403 AT3G54850.1 21798944
AT3G54850.1 KRH34817 AT3G54850.1 21798944
AT3G54850.1 KRH08093 AT4G36110.1 21798944
AT3G54850.1 KRH28787 AT4G36110.1 21798944
AT3G54850.1 KRH69796 AT4G36110.1 21798944
AT3G54850.1 KRH76667 AT4G36110.1 21798944
AT3G54850.1 KRH53808 AT4G39470.1 21798944
AT3G54850.1 KRH64138 AT4G39470.1 21798944
AT3G54850.1 KRH13893 AT5G58950.1 21798944
AT3G54850.1 KRH13899 AT5G58950.1 21798944
AT3G54850.1 KRH27396 AT5G58950.1 21798944
AT3G54850.1 KRH43461 AT5G58950.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH34817 Soybean cytosol 96.51 96.36
KRH04403 Soybean mitochondrion 53.57 93.37
VIT_13s0019g04710.t01 Wine grape cytosol 75.28 75.64
Solyc11g008390.1.1 Tomato cytosol 71.79 72.6
PGSC0003DMT400019235 Potato cytosol 71.47 72.28
AT3G54850.1 Thale cress cytosol 65.13 65.03
Bra007105.1-P Field mustard cytosol 64.98 64.67
CDX78273 Canola cytosol 64.98 64.67
TraesCS7A01G001900.1 Wheat cytosol 52.77 62.83
EER87680 Sorghum cytosol 58.0 60.9
HORVU7Hr1G000780.1 Barley cytosol 56.58 60.51
TraesCS7D01G001600.2 Wheat cytosol, plastid 57.21 59.97
Os06t0102700-01 Rice plasma membrane 56.58 59.11
GSMUA_Achr3P00280_001 Banana cytosol 55.63 58.21
Zm00001d045632_P004 Maize cytosol, mitochondrion 57.21 57.3
TraesCS4A01G498700.1 Wheat plastid 56.1 55.92
GSMUA_Achr1P24290_001 Banana cytosol 54.04 55.81
KRH24807 Soybean cytosol 55.94 53.32
KRH29807 Soybean cytosol 55.63 53.1
KRH17146 Soybean cytosol 19.97 52.94
CDX73439 Canola plastid 64.82 45.39
KRG89279 Soybean cytosol 46.28 44.85
KRH50347 Soybean nucleus 46.12 44.5
KRH00831 Soybean cytosol 43.74 43.46
KRG99865 Soybean cytosol 42.0 42.95
KRH40395 Soybean cytosol 42.95 42.68
KRH68828 Soybean cytosol 27.42 40.23
KRG97080 Soybean cytosol, nucleus 27.89 40.0
KRH15451 Soybean cytosol 17.12 39.85
KRH52088 Soybean cytosol 19.65 37.92
KRH33490 Soybean cytosol 31.22 37.52
KRG99581 Soybean cytosol 27.26 37.31
KRH46608 Soybean cytosol 27.26 37.31
KRH05594 Soybean cytosol 19.49 34.94
KRG92593 Soybean cytosol 24.25 34.54
KRH73275 Soybean cytosol 26.94 33.4
KRH51173 Soybean cytosol 21.24 31.31
KRH01984 Soybean cytosol 20.92 31.06
KRH21208 Soybean mitochondrion 35.02 30.87
KRH11061 Soybean mitochondrion, plastid 34.87 30.73
KRH59027 Soybean mitochondrion 34.55 30.49
KRH65448 Soybean plastid 23.45 30.33
KRH42917 Soybean mitochondrion 33.76 29.79
KRH36562 Soybean plastid 21.55 29.69
KRH11541 Soybean plastid 21.39 29.54
KRH72794 Soybean plasma membrane 37.72 29.27
KRH76105 Soybean cytosol, plastid 32.49 29.2
KRH30135 Soybean cytosol 38.51 29.0
KRG98177 Soybean cytosol 38.35 28.78
KRH03317 Soybean cytosol, plastid 30.27 28.25
KRG95672 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 36.29 28.13
KRH54418 Soybean cytosol, plastid 29.48 27.23
KRH69547 Soybean cytosol, plastid 30.11 26.65
KRH67390 Soybean cytosol, plastid 36.13 26.64
KRH32190 Soybean cytosol 24.72 23.53
Protein Annotations
Gene3D:1.20.930.20Gene3D:1.25.10.10EntrezGene:100777452MapMan:19.2.2.1.5.2.1Gene3D:3.30.40.10EMBL:ACUP02012720
InterPro:ARM-likeInterPro:ARM-type_foldInterPro:Adaptor_Cbl_N_dom_sfInterPro:ArmadilloEnsemblPlantsGene:GLYMA_20G182600GO:GO:0003674
GO:GO:0003824GO:GO:0004842GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0007154
GO:GO:0007165GO:GO:0007166GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567
GO:GO:0016740GO:GO:0019538UniProt:I1NHI3InterPro:IPR000225InterPro:IPR003613InterPro:IPR011989
InterPro:IPR013083InterPro:IPR036537EnsemblPlants:KRG91959ProteinID:KRG91959ProteinID:KRG91959.1PFAM:PF00514
PFAM:PF04564PFscan:PS50176PFscan:PS51698PANTHER:PTHR23315PANTHER:PTHR23315:SF111SMART:SM00185
SMART:SM00504SUPFAM:SSF48371SUPFAM:SSF57850UniParc:UPI000233DA6DInterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHD
Description
hypothetical protein
Coordinates
chr20:+:42055778..42059969
Molecular Weight (calculated)
68668.8 Da
IEP (calculated)
5.642
GRAVY (calculated)
-0.203
Length
631 amino acids
Sequence
(BLAST)
001: MGGSESSKGV VMGRLVECIK EISGLPECQN LCKRVYGNLV RRVKLLSPLF EELKDGDESL SDEQLQSFES LFVALDSAKT LLKDVNQGSK LYQALRRNDT
101: ADKFQKVTEK IEAVLSEIPY CKLEISEEVR EQIELVHAQF KRAKAQTEFA DIQLDLDMAV AQKEKDPDPA VLKRLSEKLH LRTINDLRKE SSELPELLIT
201: SGGELGDSFE MITSLLSKLR ECVLTENPEV GTGECEKLSV KHRSPVIPDD FRCPISLELM KDPVIVSTGQ TYERSCIQKW LDAGHKTCPK TQQTLVHTAL
301: TPNYVLKSLI ALWCESNGIE LPKKQGSCRT KKCGGSSLSD CDRTAISALL DKLMSNDIEQ QRAAAGELRL LAKRNADNRV CIAEAGAIPP LVDLLSSSDP
401: RTQEHAVTAL LNLSINESNK GTIVNAGAIP DIVDVLKNGS MEARENAAAT LFSLSVLDEN KVQIGAAGAI PALIKLLCEG TPRGKKDAAT AIFNLSIYQG
501: NKARAVKAGI VVPLIQFLKD AGGGMVDEAL AIMAILASHH EGRVAIGQAE PIPILVEVIR TGSPRNRENA AAVLWSLCTG DPLQLKLAKE HGAEAALQEL
601: SENGTDRAKR KAGSILELLQ RMEGVDNLQN S
Best Arabidopsis Sequence Match ( AT3G54850.1 )
(BLAST)
001: MGLTNCCSHE ELMSRLVDSV KEISGFSSSR GFIGKIQGDL VRRITLLSPF FEELIDVNVE LKKDQITGFE AMRIALDSSL ELFRSVNGGS KLFQLFDRDS
101: LVEKFRDMTV EIEAALSQIP YEKIEVSEEV REQVQLLHFQ FKRAKERWEE SDLQLSHDLA MAENVMDPDP IILKRLSQEL QLTTIDELKK ESHAIHEYFL
201: SYDGDPDDCF ERMSSLLKNL VDFVTMESSD PDPSTGSRIV SRHRSPVIPE YFRCPISLEL MKDPVIVSTG QTYERSSIQK WLDAGHKTCP KSQETLLHAG
301: LTPNYVLKSL IALWCESNGI ELPQNQGSCR TTKIGGSSSS DCDRTFVLSL LEKLANGTTE QQRAAAGELR LLAKRNVDNR VCIAEAGAIP LLVELLSSPD
401: PRTQEHSVTA LLNLSINEGN KGAIVDAGAI TDIVEVLKNG SMEARENAAA TLFSLSVIDE NKVAIGAAGA IQALISLLEE GTRRGKKDAA TAIFNLCIYQ
501: GNKSRAVKGG IVDPLTRLLK DAGGGMVDEA LAILAILSTN QEGKTAIAEA ESIPVLVEII RTGSPRNREN AAAILWYLCI GNIERLNVAR EVGADVALKE
601: LTENGTDRAK RKAASLLELI QQTEGVAVTT VP
Arabidopsis Description
PUB14U-box domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ40]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.