CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51173	Soybean	cytosol	93.41	92.76
KRH11541	Soybean	plastid	78.82	73.3
KRH36562	Soybean	plastid	78.59	72.93
VIT_00s2269g00010.t01	Wine grape	plastid	75.53	71.02
CDY09688	Canola	cytosol	71.29	66.74
Solyc11g012440.1.1	Tomato	cytosol, plastid	72.0	66.67
Bra012713.1-P	Field mustard	cytosol	71.29	66.59
PGSC0003DMT400034564	Potato	nucleus, plastid	71.53	66.38
CDX90518	Canola	plastid	71.06	66.37
Solyc04g014810.2.1	Tomato	plastid	70.35	66.3
PGSC0003DMT400060674	Potato	plastid	70.35	66.3
Bra038470.1-P	Field mustard	plastid	71.76	65.17
AT4G16490.1	Thale cress	plastid	72.0	64.83
GSMUA_Achr4P06990_001	Banana	plastid	54.35	57.32
HORVU7Hr1G038870.1	Barley	plastid	37.88	56.1
GSMUA_Achr3P29830_001	Banana	cytosol	52.94	54.09
GSMUA_Achr4P11070_001	Banana	cytosol	53.65	54.03
GSMUA_Achr1P22790_001	Banana	mitochondrion	56.47	52.98
TraesCS2A01G190800.1	Wheat	cytosol	52.47	51.15
EER97453	Sorghum	plastid	55.76	50.64
Zm00001d021951_P001	Maize	plastid	55.29	50.54
Os07t0584900-01	Rice	plastid	55.53	50.54
HORVU2Hr1G036080.15	Barley	plastid	54.35	50.44
TraesCS2D01G197200.1	Wheat	plastid	54.12	50.11
TraesCS2B01G216300.1	Wheat	plastid	53.88	50.0
KRH17146	Soybean	cytosol	27.53	49.16
Zm00001d006705_P001	Maize	plastid	53.65	49.14
KRH15451	Soybean	cytosol	31.29	49.08
KRH52088	Soybean	cytosol	36.24	47.09
KRH05594	Soybean	cytosol	37.65	45.45
KRH04403	Soybean	mitochondrion	28.24	33.15
KRH68828	Soybean	cytosol	21.41	21.16
KRH24807	Soybean	cytosol	32.71	21.0
KRG91959	Soybean	cytosol	31.06	20.92
KRG97080	Soybean	cytosol, nucleus	21.65	20.91
KRH34817	Soybean	cytosol	31.06	20.89
KRG92593	Soybean	cytosol	21.65	20.77
KRH29807	Soybean	cytosol	32.24	20.73
KRH30135	Soybean	cytosol	39.76	20.17
KRH33490	Soybean	cytosol	24.47	19.81
KRH72794	Soybean	plasma membrane	37.88	19.8
KRG98177	Soybean	cytosol	39.06	19.74
KRH00831	Soybean	cytosol	28.94	19.37
KRH40395	Soybean	cytosol	28.71	19.21
KRG89279	Soybean	cytosol	28.94	18.89
KRG99581	Soybean	cytosol	20.24	18.66
KRH50347	Soybean	nucleus	28.71	18.65
KRH46608	Soybean	cytosol	20.0	18.44
KRG99865	Soybean	cytosol	25.65	17.67
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.65	17.57
KRH67390	Soybean	cytosol, plastid	33.41	16.59
KRH21208	Soybean	mitochondrion	26.82	15.92
KRH11061	Soybean	mitochondrion, plastid	26.82	15.92
KRH42917	Soybean	mitochondrion	26.59	15.8
KRH73275	Soybean	cytosol	18.82	15.72
KRH59027	Soybean	mitochondrion	25.88	15.38
KRH76105	Soybean	cytosol, plastid	21.88	13.25
KRH03317	Soybean	cytosol, plastid	20.94	13.17
KRH69547	Soybean	cytosol, plastid	21.41	12.76
KRH54418	Soybean	cytosol, plastid	20.47	12.74
KRH32190	Soybean	cytosol	19.06	12.22
KRH65448	Soybean	plastid	10.35	9.02

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100801642	MapMan:35.1	EMBL:ACUP02010293	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	EnsemblPlantsGene:GLYMA_17G007900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	UniProt:I1MQZ9	InterPro:IPR000225
InterPro:IPR011989	ProteinID:KRH01982.1	ProteinID:KRH01983.1	EnsemblPlants:KRH01984	ProteinID:KRH01984	ProteinID:KRH01984.1
PFAM:PF00514	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF129	SMART:SM00185	SUPFAM:SSF48371
UniParc:UPI000233EDCB	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:662295..665343

Molecular Weight (calculated)

45084.4 Da

IEP (calculated)

6.767

GRAVY (calculated)

-0.020

Length

425 amino acids

Sequence
(BLAST)

001: MVSAEKDSNE THRTIIGKSM RTVRSKIFQH DHATCVSDNL TGSLMELASR NNKSVKSSIT EEQLLELSQA LSDFSACSSD ISGELQRLAT VSSSQPPAAA
101: ADIHGQPQPE PEPCLGFLQR ESFSTEIIES ISPEDLQPTV KICVDGLLSP SLAVKRSAAA KLRLLAKNRA DNRALIGESG AVAALVPLLR CSDPWTQEHA
201: VTALLNLSLL EENKALITNA GAVKSLIYVL KRGTETSKQN AACALMSLAL VEENKRSIGT CGAIPPLVAL LLGGSQRGKK DALTTLYKLC SVRQNKERAV
301: SAGAVRPLVE LVAEQGSGMA EKAMVVLNSL AGIEEGKEAI VEEGGIAALV EAIEVGSVKG KEFAVLTLYQ LCAETVTNRA LLVREGGIPP LVALSQSSPV
401: RAKLKAETLL GYLRESRHEA SCSSP

Best Arabidopsis Sequence Match ( AT4G16490.1 )
(BLAST)

001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.