Factsheet for Bra038470.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G16490.1	Thale cress	plastid	93.16	92.37
Bra012713.1-P	Field mustard	cytosol	87.39	89.89
KRH11541	Soybean	plastid	73.5	75.27
VIT_00s2269g00010.t01	Wine grape	plastid	72.65	75.22
KRH36562	Soybean	plastid	73.08	74.67
KRH51173	Soybean	cytosol	65.81	71.96
KRH01984	Soybean	cytosol	65.17	71.76
PGSC0003DMT400034564	Potato	nucleus, plastid	68.8	70.31
Solyc11g012440.1.1	Tomato	cytosol, plastid	68.38	69.72
Solyc04g014810.2.1	Tomato	plastid	66.45	68.96
PGSC0003DMT400060674	Potato	plastid	66.45	68.96
GSMUA_Achr4P06990_001	Banana	plastid	49.15	57.07
HORVU7Hr1G038870.1	Barley	plastid	34.83	56.79
GSMUA_Achr4P11070_001	Banana	cytosol	50.0	55.45
GSMUA_Achr3P29830_001	Banana	cytosol	48.93	55.05
Bra040513.1-P	Field mustard	cytosol	30.13	53.61
GSMUA_Achr1P22790_001	Banana	mitochondrion	51.71	53.42
EER97453	Sorghum	plastid	52.35	52.35
Zm00001d021951_P001	Maize	plastid	51.92	52.26
Os07t0584900-01	Rice	plastid	51.92	52.03
HORVU2Hr1G036080.15	Barley	plastid	50.85	51.97
TraesCS2A01G190800.1	Wheat	cytosol	48.29	51.83
Zm00001d006705_P001	Maize	plastid	51.28	51.72
TraesCS2D01G197200.1	Wheat	plastid	50.43	51.42
TraesCS2B01G216300.1	Wheat	plastid	50.21	51.31
Bra001006.1-P	Field mustard	plastid	36.97	48.87
Bra020360.1-P	Field mustard	cytosol	35.47	47.03
Bra007105.1-P	Field mustard	cytosol	29.49	21.77
Bra001247.1-P	Field mustard	cytosol	21.15	21.71
Bra037117.1-P	Field mustard	cytosol, plastid	33.55	21.39
Bra012155.1-P	Field mustard	cytosol	29.91	21.24
Bra024559.1-P	Field mustard	cytosol, plasma membrane	27.56	21.18
Bra007097.1-P	Field mustard	cytosol	31.41	20.94
Bra012355.1-P	Field mustard	plasma membrane	26.28	20.92
Bra040374.1-P	Field mustard	cytosol	19.87	20.62
Bra014787.1-P	Field mustard	cytosol	32.48	20.6
Bra029642.1-P	Field mustard	cytosol	20.3	20.56
Bra016165.1-P	Field mustard	cytosol, plasma membrane	26.5	20.13
Bra018212.1-P	Field mustard	cytosol	27.14	19.51
Bra033820.1-P	Field mustard	cytosol	27.35	19.45
Bra035665.1-P	Field mustard	cytosol	26.71	19.17
Bra027977.1-P	Field mustard	cytosol	26.71	19.17
Bra001998.1-P	Field mustard	cytosol	21.37	16.75
Bra032180.1-P	Field mustard	cytosol	20.73	16.61
Bra010834.1-P	Field mustard	mitochondrion	25.21	16.41
Bra032309.1-P	Field mustard	plastid	24.57	16.34
Bra006451.1-P	Field mustard	cytosol	15.38	15.42
Bra021899.1-P	Field mustard	plastid	21.37	15.13
Bra019022.1-P	Field mustard	cytosol	21.37	14.84
Bra031521.1-P	Field mustard	cytosol	18.8	13.0
Bra019924.1-P	Field mustard	mitochondrion	18.16	12.23
Bra002153.1-P	Field mustard	cytosol	20.09	6.88
Bra006452.1-P	Field mustard	cytosol	15.6	4.39

Protein Annotations

EnsemblPlants:Bra038470.1	EnsemblPlants:Bra038470.1-P	EnsemblPlantsGene:Bra038470	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23315	PANTHER:PTHR23315:SF129	PFAM:PF00514	PFscan:PS50176	SEG:seg	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI00025446D4	UniProt:M4FBK4	MapMan:35.1	:	:

Description

AT4G16490 (E=2e-229) | binding

Coordinates

chrA01:+:10995237..10996801

Molecular Weight (calculated)

49888.4 Da

IEP (calculated)

5.401

GRAVY (calculated)

-0.135

Length

468 amino acids

Sequence
(BLAST)

001: MVSVEDPLPH SNSTRFPLTT DFYGSSSPSA AKIHRQVGRS MRTVRSNFYQ SGDQSCSFVG SVGDKSEYAS EYLSDSVIDM RLGELALKNS NSVHSIASSS
101: KEEAFLDISQ AFSDFSACSS DISGELHRLA CLPSPGTDRT ENDGDKEEQD PEPCLGFLER ENFSTEIIEC ISPEDLQPTV KLCIDGLRSS SVAIKRSAAA
201: KLRLLAKNRA DNRVLIGESG AIQALIPLLR CNDPWTQEHA VTALLNLSLH DQNKAVIAAG GAIKSLVWVL KTGTETSKQN AACALLSLAL VEENKNSIGA
301: CGAIPPLVSL LLNGSCRGKK DALTTLYKLC TLQQNKERAV TAGAVKPLVD LVAEEGTGMA EKAMVVLSSL AAIEEGREAI VEEGGIAALV EAIEDGSVKG
401: KEFAVLTLLQ LCADNVRNRG LLVREGAIPP LVGLSQSGAV SVRAKRKAER LLGYLREPRK EGSSSSSP

Best Arabidopsis Sequence Match ( AT4G16490.1 )
(BLAST)

001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.