Factsheet for Bra012155.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57440	Canola	cytosol	99.7	99.7
Bra037117.1-P	Field mustard	cytosol, plastid	69.35	62.26
KRH17146	Soybean	cytosol	19.73	54.62
TraesCS3B01G443200.1	Wheat	cytosol, endoplasmic reticulum	20.79	53.94
GSMUA_Achr9P12570_001	Banana	cytosol	23.98	52.67
GSMUA_Achr4P01530_001	Banana	plasma membrane	41.43	44.68
Bra040513.1-P	Field mustard	cytosol	16.69	41.83
Solyc01g014230.2.1	Tomato	cytosol	48.71	39.58
TraesCS3A01G390200.1	Wheat	cytosol	26.1	39.18
TraesCS3D01G382500.1	Wheat	cytosol	26.25	39.14
Solyc12g100000.1.1	Tomato	cytosol, plastid	48.25	38.83
TraesCS3B01G422200.1	Wheat	cytosol	25.95	38.69
PGSC0003DMT400046295	Potato	cytosol	47.95	38.49
HORVU3Hr1G081380.1	Barley	cytosol	25.64	38.24
VIT_07s0129g00590.t01	Wine grape	cytosol	48.86	37.97
KRH72794	Soybean	plasma membrane	46.13	37.39
KRH30135	Soybean	cytosol	46.74	36.75
KRG98177	Soybean	cytosol	46.74	36.62
Bra032180.1-P	Field mustard	cytosol	30.96	34.93
Bra020360.1-P	Field mustard	cytosol	18.51	34.56
Bra001006.1-P	Field mustard	plastid	18.36	34.18
Bra007097.1-P	Field mustard	cytosol	36.12	33.9
Os08t0110500-01	Rice	plasma membrane	41.88	33.5
PGSC0003DMT400027406	Potato	cytosol	13.51	33.33
Bra014787.1-P	Field mustard	cytosol	36.87	32.93
TraesCS3B01G591000.1	Wheat	cytosol	40.97	32.49
TraesCS3A01G521300.1	Wheat	cytosol	40.67	32.25
TraesCS3D01G527900.1	Wheat	cytosol	40.67	32.25
HORVU3Hr1G113910.3	Barley	cytosol	40.97	32.22
EES01872	Sorghum	cytosol	38.85	31.8
Zm00001d035040_P007	Maize	mitochondrion	41.12	31.08
TraesCS3A01G410100.1	Wheat	cytosol	24.89	31.0
Bra012713.1-P	Field mustard	cytosol	21.4	30.99
TraesCS3B01G443500.1	Wheat	cytosol	24.73	30.81
Os01t0884400-01	Rice	plasma membrane	39.15	30.79
Zm00001d049708_P007	Maize	cytosol	40.06	29.93
Bra038470.1-P	Field mustard	plastid	21.24	29.91
Bra007105.1-P	Field mustard	cytosol	28.07	29.18
Bra012355.1-P	Field mustard	plasma membrane	25.34	28.4
Bra018212.1-P	Field mustard	cytosol	27.77	28.11
Bra033820.1-P	Field mustard	cytosol	27.92	27.96
Zm00001d042608_P002	Maize	cytosol	39.0	27.78
Bra024559.1-P	Field mustard	cytosol, plasma membrane	25.49	27.59
Bra016165.1-P	Field mustard	cytosol, plasma membrane	25.49	27.27
TraesCS3A01G410000.1	Wheat	cytosol	26.1	27.13
EES14396	Sorghum	cytosol	41.27	27.01
Bra040374.1-P	Field mustard	cytosol	18.36	26.83
Bra001247.1-P	Field mustard	cytosol	18.36	26.54
Bra035665.1-P	Field mustard	cytosol	26.1	26.38
Bra027977.1-P	Field mustard	cytosol	25.8	26.07
Bra029642.1-P	Field mustard	cytosol	17.91	25.54
Bra001998.1-P	Field mustard	cytosol	21.55	23.79
Bra032309.1-P	Field mustard	plastid	24.58	23.01
Bra021899.1-P	Field mustard	plastid	22.76	22.69
Bra010834.1-P	Field mustard	mitochondrion	24.73	22.67
Bra006451.1-P	Field mustard	cytosol	15.33	21.63
Bra019022.1-P	Field mustard	cytosol	21.7	21.22
Bra019924.1-P	Field mustard	mitochondrion	18.21	17.27
Bra031521.1-P	Field mustard	cytosol	17.45	16.99
Bra002153.1-P	Field mustard	cytosol	18.66	9.0
Bra006452.1-P	Field mustard	cytosol	17.0	6.74

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
EnsemblPlantsGene:Bra012155	EnsemblPlants:Bra012155.1	EnsemblPlants:Bra012155.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	UniProt:M4D6P6	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF7	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI00025416E8	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

AT5G67340 (E=2e-216) | armadillo/beta-catenin repeat family protein / U-box domain-containing protein

Coordinates

chrA07:-:9675785..9678694

Molecular Weight (calculated)

72181.1 Da

IEP (calculated)

5.283

GRAVY (calculated)

-0.137

Length

659 amino acids

Sequence
(BLAST)

001: MPLLDNPVVS DVSPSELLNN SFEELSQYVD ELREQFESWQ PLSSRILYVL RIESLASKMR ESSLEVFQLL KHLPADLVSP SEDCIELVKL VGREEVSYTI
101: DLALIDQRKG VELTPEVLVK IAESVGLRSN QDILIEGVVL TNLKEDANLV KDNTRAGFIK GLIYLTKQMH DYLAKIEQSQ SPSDFFCPLS LQLMTDPVTV
201: TSGQTYERAF IEKWFDMGLM VCPKTRHALS QTTLTPNFTV KAFIANWCES NNVNPPDPLE LIHSNQPFPL LVGSCSADDS RDSLPLPVMD DTLKCNHIES
301: VDASKCEELH QVLTRSASAP GIVSKVVSKA NTSISQAPGE TVPQPWIIPA TMKETGSSSN MEAEETGGSS SMEVEVKKLI QDLKSSSLDA QREATAQLRL
401: LTKDIPDDRT VIARCGAIAA LVNKLYSMDK MIQAEAVTCL LNLSLDDSNK TVIAYSGVFK PLVHVLKTGN MEAKENSTRA LVSLSKAEEN RTKMLQAGAI
501: EPLVRLMGNG SPRGKKDAAT ALTNLATRNR EKEMVIRGGG VRYLIQMMNP AAGTVERAVV VLANLANVPE AKIAIRDGGG IPLLVDVVEL GSPRGQENAA
601: AALCVLCMDS SRFCNIVIRE GAIPPLVALT RSGTTRAKEK AKSLLKYFEA LKQENQRRN

Best Arabidopsis Sequence Match ( AT5G67340.2 )
(BLAST)

001: MMVHMEVSWL RVLLDNISSY LSLSSMDDLS SNPAHKYYTR GEDIGKLIKP VLENLIDSDA APSELLNNGF EELAQYVDEL REQFQSWQPL STRIFYVLRI
101: ESLASKLRES SLEVFQLLKH CEQHLPADLI SPSFEECIEL VKLVARDEIS YTIDQALKDQ KKGVGPTSEV LVKIAESTGL RSNQEILVEG VVLTNMKEDA
201: ELTDNDTEAE YLDGLISLTT QMHEYLSDIK QAQLRCPVRV PSDFRCSLSL ELMTDPVIVA SGQTFERVFI QKWIDMGLMV CPKTRQALSH TTLTPNFIVR
301: AFLASWCETN NVYPPDPLEL IHSSEPFPLL VESVRASSSE NGHSESLDAE ELRQVFSRSA SAPGIVSEVV CKTKRNNNAA ADRSLTRSNT PWKFPEERHW
401: RHPGIIPATV RETGSSSSIE TEVKKLIDDL KSSSLDTQRE ATARIRILAR NSTDNRIVIA RCEAIPSLVS LLYSTDERIQ ADAVTCLLNL SINDNNKSLI
501: AESGAIVPLI HVLKTGYLEE AKANSAATLF SLSVIEEYKT EIGEAGAIEP LVDLLGSGSL SGKKDAATAL FNLSIHHENK TKVIEAGAVR YLVELMDPAF
601: GMVEKAVVVL ANLATVREGK IAIGEEGGIP VLVEVVELGS ARGKENATAA LLQLCTHSPK FCNNVIREGV IPPLVALTKS GTARGKEKAQ NLLKYFKAHR
701: QSNQRRG

Arabidopsis Description

PUB2U-box domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.