Factsheet for Bra002153.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38506	Canola	cytosol	30.75	92.11
CDY68352	Canola	cytosol	30.45	91.23
AT5G18320.1	Thale cress	cytosol	23.21	69.21
AT5G18340.1	Thale cress	nucleus	19.33	57.89
AT5G18330.1	Thale cress	cytosol	18.52	56.85
Bra006451.1-P	Field mustard	cytosol	17.79	52.03
GSMUA_Achr6P06560_001	Banana	cytosol	11.13	40.75
GSMUA_Achr10P...	Banana	cytosol	11.05	40.37
KRH68828	Soybean	cytosol	12.59	40.0
VIT_04s0043g00840.t01	Wine grape	cytosol	13.1	39.34
VIT_00s0524g00030.t01	Wine grape	cytosol	12.81	38.98
KRH46608	Soybean	cytosol	13.1	38.83
KRG97080	Soybean	cytosol, nucleus	12.37	38.41
KRG99581	Soybean	cytosol	12.96	38.39
Bra001247.1-P	Field mustard	cytosol	12.81	38.38
Solyc09g056450.2.1	Tomato	cytosol	12.59	38.31
PGSC0003DMT400016998	Potato	cytosol	12.59	38.31
Bra040374.1-P	Field mustard	cytosol	12.52	37.92
KRG92593	Soybean	cytosol	12.23	37.7
Bra029642.1-P	Field mustard	cytosol	12.74	37.66
PGSC0003DMT400011486	Potato	cytosol	9.44	36.13
GSMUA_Achr9P01670_001	Banana	cytosol	12.23	35.84
Os02t0488600-01	Rice	cytosol, nucleus	10.91	35.22
Solyc04g050780.1.1	Tomato	cytosol	10.76	34.11
EES06804	Sorghum	cytosol	11.2	32.97
PGSC0003DMT400039084	Potato	cytosol	10.69	32.96
Zm00001d016501_P001	Maize	cytosol	11.2	32.9
Solyc04g050770.1.1	Tomato	cytosol	10.61	32.73
TraesCS2B01G294100.1	Wheat	nucleus	10.91	32.39
TraesCS2A01G276400.1	Wheat	nucleus	10.91	32.39
Os04t0348400-01	Rice	cytosol	10.83	32.24
TraesCS2D01G275400.1	Wheat	nucleus	10.83	32.17
HORVU2Hr1G067610.6	Barley	cytosol	10.91	31.43
Bra040513.1-P	Field mustard	cytosol	5.34	27.76
Bra020360.1-P	Field mustard	cytosol	6.37	24.65
Bra001006.1-P	Field mustard	plastid	6.22	24.01
Bra007105.1-P	Field mustard	cytosol	10.91	23.5
Bra012355.1-P	Field mustard	plasma membrane	10.1	23.47
Bra018212.1-P	Field mustard	cytosol	10.83	22.73
Bra033820.1-P	Field mustard	cytosol	10.83	22.49
Bra024559.1-P	Field mustard	cytosol, plasma membrane	9.81	22.0
Bra035665.1-P	Field mustard	cytosol	10.4	21.78
Bra016165.1-P	Field mustard	cytosol, plasma membrane	9.81	21.75
Bra027977.1-P	Field mustard	cytosol	10.18	21.32
Bra038470.1-P	Field mustard	plastid	6.88	20.09
Bra012713.1-P	Field mustard	cytosol	6.59	19.78
Bra012155.1-P	Field mustard	cytosol	9.0	18.66
Bra007097.1-P	Field mustard	cytosol	9.3	18.09
Bra001998.1-P	Field mustard	cytosol	7.91	18.09
Bra037117.1-P	Field mustard	cytosol, plastid	9.52	17.71
Bra032309.1-P	Field mustard	plastid	9.08	17.61
Bra010834.1-P	Field mustard	mitochondrion	9.22	17.52
Bra014787.1-P	Field mustard	cytosol	9.44	17.48
Bra019022.1-P	Field mustard	cytosol	8.42	17.06
Bra032180.1-P	Field mustard	cytosol	7.25	16.95
Bra021899.1-P	Field mustard	plastid	8.05	16.64
Bra006452.1-P	Field mustard	cytosol	18.96	15.59
Bra019924.1-P	Field mustard	mitochondrion	7.39	14.53
Bra031521.1-P	Field mustard	cytosol	6.95	14.03

Protein Annotations

Gene3D:1.25.10.10	MapMan:26.8.2.1	Gene3D:3.30.40.10	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	Gene3D:3.80.10.10
InterPro:AAA+_ATPase	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra002153	EnsemblPlants:Bra002153.1	EnsemblPlants:Bra002153.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0043531	InterPro:IPR000157	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	InterPro:IPR032675	InterPro:IPR035897	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_3
UniProt:M4CD72	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582	PFAM:PF04564
PFAM:PF07725	PRINTS:PR00364	PFscan:PS50104	PFscan:PS51698	PANTHER:PTHR43904	PANTHER:PTHR43904:SF1
SMART:SM00255	SMART:SM00382	SMART:SM00504	SUPFAM:SSF46785	SUPFAM:SSF48371	SUPFAM:SSF52058
SUPFAM:SSF52200	SUPFAM:SSF52540	SUPFAM:SSF57850	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0002543949
InterPro:Ubox_domain	InterPro:WH_DNA-bd_sf	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT5G18320 (E=4e-148) | armadillo/beta-catenin repeat family protein / U-box domain-containing protein

Coordinates

chrA10:+:11214193..11221776

Molecular Weight (calculated)

153955.0 Da

IEP (calculated)

8.110

GRAVY (calculated)

-0.219

Length

1366 amino acids

Sequence
(BLAST)

0001: MASSSCLTWK HNVFPSFCGG DVRKGFLSHL LKELESKGIS PFIDNNIERG QSIAPELVQA IKESRVALVL LSPNYASSRW CLDELVEIMK CREREQQTVI
0101: TIFYGVDPSD VRNQTGDFGK VFNKTCDGRT EGVKEAWKKA LVDVGNIAGY DSSRWDNEAK MIEEIAEELM KVLRITPSKD FDDFVGMEAR ITEIKCLLSQ
0201: QSDAKVKFIG IVGPAGIGKT STARALFDRL SRDFEFSTFI EDIRGSKEMP SLGGSHHKYQ LDCQKELLSR LFNQKDSKVG HLGVAEQRLR GKKVLIVLDE
0301: MDCLFKLEAM AKKADWFGHG SVIIITTEDR KLLEAQRIKW IYNMELPDEV EAMQILCQYA FGQKSIDYGP ARIIARALHN QFYPGIRRFE IFCQYAFDQK
0401: SQNYVPETRT VKALSNQCIL DIRGSSEMSS LLGSDYKYQL DYLYDFYELA QEVTELAGGL PLALRVLGSS LRGMSRDEWR NALPRLKSSL DKGIESILMF
0501: GYNGLRDDKD RTLFLYIACF FVGFEVDRIK HCLEDCKLQV VHGLQNLEQK SLIYTENGYV GMHALLQQMG RDIVKKKTEE IGERQFLMDT KDISDLLEDE
0601: DTGTGKKVIG IKLQALGEEE IQISKSAFQG MKNLQFLLID YRNVRIREGL SCLPDKLRLL EWPRCPLTCL PSKFSCKFLV ELIMTNSKLE KLWDGIKPLQ
0701: RLKRMVLRES RYLKKIPDLT TATSLEELDL HGCISLLELT STIAFATKLT RCKLGDCFRL KELPSSMGRL INLEVLYMTG CRNLNEFPNV PDSIEELVLS
0801: KTRIKKIPPL IVNLSRLRRL IMCGCKKLKK ISRNVSKLEN LQYLDLSNSD NLNNGFKAVI RALIDVIKEG DLSATKEAYY ALYQLYFLLE NREKAVSEGS
0901: LYSRLNSPAE MADSTTTAAD AVTLKREFNK ILTEILSYGG GSKDHGETGV LMKAIDEANR IINSLREVEP ETDILSPSPV KMDVPKEFKC TLSKKIMIEP
1001: VIIASGQTYE KRFIQEWLKR ERTCPISNQV LSHLSFTPNL LVDELIKQWC LVNKFKRPKS SEEIVNELFT DGIDSLLQRI SSPSSVADQA QAAEELRRQT
1101: KRFANVRAFL VSELPGSITR LLTPLSAVDS NLDLQENLVT TLFNLSIVEK NKTVIAETPL VIPLLTHSLK QGTAETRRNS AATLLSLSAI DSNRLIIGNS
1201: ETLKALIGLI EEGGLFITEA ASAVFNICTV SENREKAISS GLIPVLTNKI KEGSSVAELL SLLALVSTHN RGVKEMNDLG LINDLLSILR KPSCPVTHEN
1301: AVVIVFNMCD RNRDRSGRLS VLSEEENQHG TFTKLAKQGS DRAVRKAEAI LKWLKRHGTG KAPQRG

Best Arabidopsis Sequence Match ( AT5G18370.1 )
(BLAST)

0001: MAIAEVIGFF TLVCVIWYWV YKKHKNLQLK ICRSSIESSS SSSSLSSPPS LSSPISRTWT HQVFPSFRGE DVRKGFLSHI QKEFKSKGIV PFIDDEMKRG
0101: ESIGPGLFQA IRESKIAIVL LSKNYASSSW CLNELVEIMN CREEIGQTVM TVFYQVDPSD VRKQTGDFGK AFKKTCVGKT QEVKQRWSRA LMDVANILGQ
0201: DSRKWDKEAD MIVKVAKDVS DVLSYTPSRD FDDYVGIRPH ITRINSLLCL ESSDVRMIGI LGPPGIGKTT IARVLYDQIS EKFQFSAFIE NIRLSYWKGW
0301: HDEGNLDFPV EIMTGDRQRK LNLQRRLLSE LFNQKDIQVR HLGAVQERLR DHKVLVILDG VDQLEQLTAL AKETQWFGYG SRIIITTQDQ RLLRAHEINH
0401: VYKVDLPATD EALQIFCLYA FGQKFPYDGF KKLAREFTAL AGELPLGLRV LGSYLRGMSL EEWKNALPRL RTSLDGEIEK TLRFAYNVLS DKDKSLFLHI
0501: ACLFNGCQVN HVKQWLANSS LDVNHGFEVL SNKSLISTDM GLVRMHSLLQ QLGVDIVRKQ SIGEPEKRQF LVDVNEISDV ITDNTGTGTI LGIMLHVSKI
0601: EDVLVIEETV FDRMTNLQFL ILDECLRDKL NLPLGLNCLP RKIRLLRWDY CPLSIWPSKF SAKFLVELIM RANKFEKLWE GIQPLKNLKR MELGDARNLK
0701: EIPDLSNATN LESLLLSFCT SLLEIPSSIR GTTNLKELDL GGCASLVKLS SCICNATSLE ELNLSACSNL VELPCALPGD SNMRSLSKLL LNGSSRLKTF
0801: PEISTNIQEL NLSGTAIEEV PSSIRLWSRL DKLDMSRCKN LKMFPPVPDG ISVLNLSETE IEDIPPWVEN LSQLRHFVMI RCKKLDNISL SRISKMEGVH
0901: CLQITRGDED VSGDSIVNIR WYSNFPNQWT LQSDMLQICL PELVYTSPVS LHFISNEFKT IPDCIKNLSQ LHQLSFYRCH KLVSLPQLSD CLSSLDAENC
1001: VSLETIDGSF HNPDIRLNFL NCNNLNQEAR ELIQKSVCKH ALLPSGEVPA YFIHRAIGDS VTIHLKERHL PLYLIFKASL VLFNDDEINY DYDDDDDDDY
1101: DEEVIVYGDY DSYPHSDDYT KQETMRLSCR VEGKQNGLTI QYGSSVHLLP TPHRYTEHVY IFEASFSLGE CNSPEAESEL VFDFKVHDYF WAIKECGLRL
1201: LELPHAHGDD

Arabidopsis Description

DSC2Disease resistance-like protein DSC2 [Source:UniProtKB/Swiss-Prot;Acc:F4JWM0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.