Factsheet for PGSC0003DMT400011486

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g050780.1.1	Tomato	cytosol	80.11	66.36
PGSC0003DMT400039084	Potato	cytosol	81.51	65.69
VIT_04s0043g00840.t01	Wine grape	cytosol	53.22	41.76
PGSC0003DMT400016998	Potato	cytosol	49.86	39.64
KRH68828	Soybean	cytosol	47.06	39.07
KRG97080	Soybean	cytosol, nucleus	47.9	38.86
Bra001247.1-P	Field mustard	cytosol	48.74	38.16
CDX74050	Canola	cytosol	48.46	37.94
Bra040374.1-P	Field mustard	cytosol	47.06	37.25
CDY71737	Canola	cytosol	48.18	37.23
CDY28059	Canola	cytosol	48.18	37.23
AT3G07360.1	Thale cress	cytosol	47.9	37.17
CDY08002	Canola	cytosol	47.34	37.14
Bra029642.1-P	Field mustard	cytosol	47.9	37.01
KRG92593	Soybean	cytosol	45.38	36.57
GSMUA_Achr6P06560_001	Banana	cytosol	36.13	34.58
GSMUA_Achr9P01670_001	Banana	cytosol	44.26	33.91
GSMUA_Achr10P...	Banana	cytosol	34.73	33.16
TraesCS2A01G276400.1	Wheat	nucleus	40.34	31.3
TraesCS2B01G294100.1	Wheat	nucleus	40.34	31.3
Os02t0488600-01	Rice	cytosol, nucleus	36.69	30.97
TraesCS2D01G275400.1	Wheat	nucleus	39.78	30.87
HORVU2Hr1G067610.6	Barley	cytosol	40.34	30.38
EES06804	Sorghum	cytosol	38.66	29.74
CDY68352	Canola	cytosol	37.82	29.61
Os04t0348400-01	Rice	cytosol	37.82	29.41
Zm00001d016501_P001	Maize	cytosol	37.82	29.03
CDY38506	Canola	cytosol	36.41	28.51
AT5G18320.1	Thale cress	cytosol	36.13	28.17
AT5G18330.1	Thale cress	cytosol	33.05	26.52
Bra006451.1-P	Field mustard	cytosol	33.61	25.7
AT5G18340.1	Thale cress	nucleus	32.49	25.44
CDX70810	Canola	cytosol	33.61	25.42
CDY51235	Canola	extracellular, golgi	33.33	22.93
PGSC0003DMT400027542	Potato	cytosol	20.73	20.79
PGSC0003DMT400030161	Potato	cytosol	20.17	20.11
PGSC0003DMT400019235	Potato	cytosol	31.93	18.27
PGSC0003DMT400078166	Potato	cytosol	32.49	17.55
PGSC0003DMT400001049	Potato	cytosol	32.21	17.32
PGSC0003DMT400027406	Potato	cytosol	12.61	16.85
PGSC0003DMT400015349	Potato	cytosol	30.53	16.85
PGSC0003DMT400078473	Potato	cytosol	29.97	16.46
PGSC0003DMT400025648	Potato	cytosol	29.69	16.33
PGSC0003DMT400060674	Potato	plastid	19.89	15.74
PGSC0003DMT400034564	Potato	nucleus, plastid	20.17	15.72
PGSC0003DMT400075612	Potato	cytosol	28.29	15.66
PGSC0003DMT400077205	Potato	cytosol	28.85	15.17
PGSC0003DMT400095861	Potato	cytosol, plasma membrane	22.97	14.64
PGSC0003DMT400073254	Potato	cytosol	29.13	14.36
PGSC0003DMT400026700	Potato	cytosol	31.09	14.27
PGSC0003DMT400062931	Potato	cytosol	26.89	14.08
PGSC0003DMT400046295	Potato	cytosol	31.37	13.64
PGSC0003DMT400082693	Potato	cytosol	9.24	13.52
PGSC0003DMT400071349	Potato	plastid	25.49	13.15
PGSC0003DMT400090858	Potato	cytosol, mitochondrion	14.29	11.21
Bra002153.1-P	Field mustard	cytosol	36.13	9.44
CDX70805	Canola	cytosol	34.73	8.05
CDY51234	Canola	cytosol	34.45	7.42
Bra006452.1-P	Field mustard	cytosol	34.45	7.41

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	UniProt:M0ZZM2	PFAM:PF04564	EnsemblPlantsGene:PGSC0003DMG400004510	PGSC:PGSC0003DMG400004510	EnsemblPlants:PGSC0003DMT400011486
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF75	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI0002958AD3	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	:	:	:

Description

Spotted leaf protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004510]

Coordinates

chr4:-:46360719..46362636

Molecular Weight (calculated)

39884.7 Da

IEP (calculated)

5.199

GRAVY (calculated)

-0.098

Length

357 amino acids

Sequence
(BLAST)

001: MAESSEECRR LPASASADEL KRELQRRVNS IIEDADYSIE DTDEAMHCLS ALKELKVRPT PPLEYLCPLS HQLMKDPVVL ASGQTYDRLF IEKWLNKGSR
101: TCPETKEVLP HSDLIPNLLM RKLISLWCND HGIELPDKEE QGIIPESDRY HFNSLLDTLS SNDDVLEKMK AAKLVCILTK RFPPLRAFFE EDSVAVTKLL
201: EPLMSGNVND HPKLQEDLIT TVMNISLHDP NKKLIATNPI VIPLLVESLK FGTLETRSNS TAALCTLSSL ESNKCIIMKA GALEPLVKLL DEGPLLAMKD
301: AAAAIVSLGV VKENRSIAVF EGAVKVIMKK ITDRIPVDEL LVLLAMLSSY DKPMSRW

Best Arabidopsis Sequence Match ( AT3G07360.1 )
(BLAST)

001: MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IDDEDDLGVQ TIDQLQDALS ALREATMRKM AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA

Arabidopsis Description

PUB9RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.