Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 1
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr10P... | Banana | cytosol | 71.05 | 70.86 |
GSMUA_Achr9P01670_001 | Banana | cytosol | 82.04 | 65.67 |
Os02t0488600-01 | Rice | cytosol, nucleus | 65.95 | 58.16 |
EES06804 | Sorghum | cytosol | 65.15 | 52.37 |
Zm00001d016501_P001 | Maize | cytosol | 62.47 | 50.11 |
KRH68828 | Soybean | cytosol | 55.76 | 48.37 |
VIT_04s0043g00840.t01 | Wine grape | cytosol | 58.71 | 48.13 |
Os04t0348400-01 | Rice | cytosol | 58.45 | 47.49 |
KRG97080 | Soybean | cytosol, nucleus | 55.5 | 47.05 |
PGSC0003DMT400016998 | Potato | cytosol | 55.23 | 45.88 |
VIT_00s0524g00030.t01 | Wine grape | cytosol | 54.96 | 45.66 |
TraesCS2D01G275400.1 | Wheat | nucleus | 56.03 | 45.43 |
TraesCS2B01G294100.1 | Wheat | nucleus | 56.03 | 45.43 |
TraesCS2A01G276400.1 | Wheat | nucleus | 56.03 | 45.43 |
Solyc09g056450.2.1 | Tomato | cytosol | 54.42 | 45.21 |
Bra001247.1-P | Field mustard | cytosol | 54.16 | 44.3 |
Bra040374.1-P | Field mustard | cytosol | 53.35 | 44.12 |
HORVU2Hr1G067610.6 | Barley | cytosol | 56.03 | 44.09 |
CDX74050 | Canola | cytosol | 53.35 | 43.64 |
CDY08002 | Canola | cytosol | 53.08 | 43.52 |
AT3G07360.1 | Thale cress | cytosol | 53.35 | 43.26 |
KRG99581 | Soybean | cytosol | 53.35 | 43.17 |
CDY71737 | Canola | cytosol | 53.35 | 43.07 |
CDY28059 | Canola | cytosol | 53.35 | 43.07 |
Bra029642.1-P | Field mustard | cytosol | 52.81 | 42.64 |
KRH46608 | Soybean | cytosol | 52.55 | 42.52 |
KRG92593 | Soybean | cytosol | 49.06 | 41.31 |
Solyc04g050770.1.1 | Tomato | cytosol | 44.77 | 37.7 |
Solyc04g050780.1.1 | Tomato | cytosol | 41.82 | 36.19 |
PGSC0003DMT400011486 | Potato | cytosol | 34.58 | 36.13 |
PGSC0003DMT400039084 | Potato | cytosol | 42.9 | 36.12 |
CDY68352 | Canola | cytosol | 40.75 | 33.33 |
GSMUA_Achr9P12570_001 | Banana | cytosol | 26.27 | 32.67 |
GSMUA_Achr4P03430_001 | Banana | cytosol | 23.32 | 32.34 |
CDY38506 | Canola | cytosol | 39.41 | 32.24 |
AT5G18320.1 | Thale cress | cytosol | 38.87 | 31.66 |
AT5G18340.1 | Thale cress | nucleus | 33.78 | 27.63 |
GSMUA_Achr10P... | Banana | cytosol | 27.08 | 27.15 |
CDX70810 | Canola | cytosol | 34.32 | 27.12 |
GSMUA_Achr3P18890_001 | Banana | cytosol | 26.01 | 27.02 |
AT5G18330.1 | Thale cress | cytosol | 32.17 | 26.97 |
GSMUA_Achr4P06990_001 | Banana | plastid | 28.69 | 26.55 |
GSMUA_Achr6P07710_001 | Banana | cytosol | 25.2 | 26.33 |
GSMUA_Achr8P25140_001 | Banana | plastid | 28.95 | 25.71 |
Bra006451.1-P | Field mustard | cytosol | 31.9 | 25.48 |
GSMUA_Achr4P14130_001 | Banana | cytosol | 23.59 | 25.36 |
GSMUA_Achr4P11070_001 | Banana | cytosol | 26.81 | 23.7 |
GSMUA_Achr3P29830_001 | Banana | cytosol | 26.27 | 23.56 |
GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 25.2 | 23.15 |
CDY51235 | Canola | extracellular, golgi | 31.9 | 22.93 |
GSMUA_Achr6P36530_001 | Banana | cytosol | 39.41 | 22.27 |
GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 24.4 | 21.98 |
GSMUA_Achr4P01530_001 | Banana | plasma membrane | 35.92 | 21.93 |
GSMUA_Achr1P22790_001 | Banana | mitochondrion | 26.27 | 21.63 |
GSMUA_Achr1P24290_001 | Banana | cytosol | 34.32 | 20.95 |
GSMUA_Achr3P00280_001 | Banana | cytosol | 32.71 | 20.23 |
GSMUA_Achr5P16030_001 | Banana | cytosol | 25.47 | 20.17 |
GSMUA_Achr10P... | Banana | cytosol | 33.78 | 20.13 |
GSMUA_Achr6P34170_001 | Banana | cytosol | 35.39 | 19.88 |
GSMUA_Achr5P21360_001 | Banana | cytosol | 39.14 | 19.24 |
GSMUA_Achr5P28670_001 | Banana | cytosol | 29.22 | 19.12 |
GSMUA_Achr9P15600_001 | Banana | cytosol | 34.32 | 18.93 |
GSMUA_Achr2P15530_001 | Banana | mitochondrion | 32.44 | 18.33 |
GSMUA_Achr4P04900_001 | Banana | cytosol | 25.2 | 17.8 |
GSMUA_Achr4P00200_001 | Banana | plastid | 32.17 | 17.05 |
GSMUA_Achr5P07140_001 | Banana | cytosol | 28.69 | 17.04 |
GSMUA_Achr4P05030_001 | Banana | cytosol | 23.59 | 16.79 |
GSMUA_Achr7P22130_001 | Banana | cytosol | 28.42 | 16.75 |
GSMUA_Achr9P14560_001 | Banana | cytosol | 26.01 | 16.58 |
GSMUA_Achr9P28820_001 | Banana | mitochondrion | 26.27 | 16.36 |
GSMUA_Achr7P09440_001 | Banana | mitochondrion | 26.81 | 15.67 |
GSMUA_Achr3P06160_001 | Banana | plastid | 22.79 | 14.99 |
GSMUA_Achr10P... | Banana | cytosol | 34.05 | 14.7 |
GSMUA_Achr10P... | Banana | mitochondrion | 13.94 | 11.5 |
Bra002153.1-P | Field mustard | cytosol | 40.75 | 11.13 |
CDX70805 | Canola | cytosol | 32.98 | 7.98 |
CDY51234 | Canola | cytosol | 34.85 | 7.85 |
Bra006452.1-P | Field mustard | cytosol | 34.85 | 7.83 |
Protein Annotations
MapMan:19.2.2.1.5.2.1 | Gene3D:3.30.40.10 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr6G06560_001 | EnsemblPlants:GSMUA_Achr6P06560_001 | EnsemblPlants:GSMUA_Achr6T06560_001 | InterPro:IPR003613 |
InterPro:IPR013083 | UniProt:M0T4Q4 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF75 |
SMART:SM00504 | SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniParc:UPI0002948E9D | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD |
SEG:seg | : | : | : | : | : |
Description
U-box domain-containing protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr6G06560_001]
Coordinates
chr6:+:4418997..4420524
Molecular Weight (calculated)
40576.8 Da
IEP (calculated)
7.879
GRAVY (calculated)
-0.170
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDPVVLASG QTYDRRFIQE WLSSGNLTCP RTQQVLSDTT LTPNHLVRSM ISQWCTEHGV TLPPLDDEQE EGLITRKERN ALCRILDKLS LSSSIPDRKQ
101: AVRELRLLTK GSRSFRALVG ENPGTIPLLL SALSVPGLYS DTAVQGDIVT TVLNLSIHDS NKKIIGDNPQ AIPSLIDVLK TGTMETRSNS AAALFSLSAL
201: DANKLKIGEL GAMKPLVELL EEGSPSAKKD AGSAIFSLCM VHENRARAVR EGVVGVVLTA ITHQSLVDES LAILALLSGH QEAVEEIADT SGVPPLLGII
301: KDSSCARNKE NAVVVLFAVC MHDRTKLREV GEEEKSNGSI SRLAQNGTSR ARRKATGILD KWKRTLHSTH YSY
101: AVRELRLLTK GSRSFRALVG ENPGTIPLLL SALSVPGLYS DTAVQGDIVT TVLNLSIHDS NKKIIGDNPQ AIPSLIDVLK TGTMETRSNS AAALFSLSAL
201: DANKLKIGEL GAMKPLVELL EEGSPSAKKD AGSAIFSLCM VHENRARAVR EGVVGVVLTA ITHQSLVDES LAILALLSGH QEAVEEIADT SGVPPLLGII
301: KDSSCARNKE NAVVVLFAVC MHDRTKLREV GEEEKSNGSI SRLAQNGTSR ARRKATGILD KWKRTLHSTH YSY
001: MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IDDEDDLGVQ TIDQLQDALS ALREATMRKM AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA
Arabidopsis Description
PUB9RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.