Factsheet for GSMUA_Achr3P18890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P07710_001	Banana	cytosol	82.73	83.19
GSMUA_Achr10P...	Banana	cytosol	82.73	79.84
GSMUA_Achr4P03430_001	Banana	cytosol	54.32	72.49
Bra040513.1-P	Field mustard	cytosol	48.47	66.16
CDY28679	Canola	cytosol	47.91	65.4
KRH15451	Soybean	cytosol	48.19	63.84
GSMUA_Achr5P16030_001	Banana	cytosol	82.45	62.84
Os07t0587500-01	Rice	cytosol	62.95	62.43
TraesCS2D01G194400.1	Wheat	cytosol	62.67	62.33
TraesCS2B01G213900.1	Wheat	cytosol	62.67	62.33
TraesCS2A01G193000.1	Wheat	cytosol	62.4	62.05
GSMUA_Achr4P14130_001	Banana	cytosol	59.89	61.96
Zm00001d021978_P001	Maize	cytosol	62.4	61.88
EER97464	Sorghum	cytosol	62.4	61.88
Zm00001d006726_P001	Maize	cytosol	61.28	61.11
Solyc12g088360.1.1	Tomato	cytosol	45.96	60.0
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	67.69	59.85
Bra001006.1-P	Field mustard	plastid	58.5	59.32
CDX74298	Canola	plastid	58.5	59.32
CDX91947	Canola	plastid	57.94	58.92
CDY32692	Canola	peroxisome	57.94	58.92
Bra020360.1-P	Field mustard	cytosol	57.66	58.64
KRH52088	Soybean	cytosol	53.2	58.41
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	67.13	58.21
KRH05594	Soybean	cytosol	56.82	57.95
CDY02828	Canola	cytosol	57.1	57.91
AT3G01400.1	Thale cress	cytosol	56.82	57.46
Solyc04g077850.2.1	Tomato	cytosol	56.82	57.3
PGSC0003DMT400027542	Potato	cytosol	56.82	57.3
PGSC0003DMT400030161	Potato	cytosol	56.82	56.98
AT5G58680.1	Thale cress	cytosol	56.55	56.86
VIT_18s0001g09130.t01	Wine grape	cytosol	55.71	51.55
GSMUA_Achr9P12570_001	Banana	cytosol	39.83	47.67
Os03t0435300-00	Rice	cytosol	47.91	43.0
Zm00001d003967_P001	Maize	plastid	48.75	38.89
GSMUA_Achr4P06990_001	Banana	plastid	43.45	38.71
GSMUA_Achr4P11070_001	Banana	cytosol	44.29	37.68
GSMUA_Achr3P29830_001	Banana	cytosol	40.95	35.34
GSMUA_Achr1P22790_001	Banana	mitochondrion	41.78	33.11
GSMUA_Achr6P06560_001	Banana	cytosol	27.02	26.01
GSMUA_Achr4P01530_001	Banana	plasma membrane	43.18	25.37
GSMUA_Achr10P...	Banana	cytosol	25.91	24.87
GSMUA_Achr9P01670_001	Banana	cytosol	28.69	22.1
GSMUA_Achr6P36530_001	Banana	cytosol	40.11	21.82
GSMUA_Achr8P25140_001	Banana	plastid	23.96	20.48
GSMUA_Achr5P21360_001	Banana	cytosol	39.55	18.71
GSMUA_Achr3P00280_001	Banana	cytosol	28.97	17.25
GSMUA_Achr1P24290_001	Banana	cytosol	26.74	15.71
GSMUA_Achr10P...	Banana	cytosol	27.02	15.5
GSMUA_Achr3P06160_001	Banana	plastid	23.96	15.17
GSMUA_Achr9P15600_001	Banana	cytosol	27.58	14.64
GSMUA_Achr9P14560_001	Banana	cytosol	22.56	13.85
GSMUA_Achr6P34170_001	Banana	cytosol	25.07	13.55
GSMUA_Achr4P00200_001	Banana	plastid	26.18	13.35
GSMUA_Achr2P15530_001	Banana	mitochondrion	24.51	13.33
GSMUA_Achr4P04900_001	Banana	cytosol	18.94	12.88
GSMUA_Achr7P22130_001	Banana	cytosol	22.28	12.64
GSMUA_Achr5P28670_001	Banana	cytosol	19.5	12.28
GSMUA_Achr5P07140_001	Banana	cytosol	20.61	11.78
GSMUA_Achr9P28820_001	Banana	mitochondrion	19.5	11.69
GSMUA_Achr4P05030_001	Banana	cytosol	16.99	11.64
GSMUA_Achr10P...	Banana	cytosol	27.3	11.34
GSMUA_Achr7P09440_001	Banana	mitochondrion	18.94	10.66
GSMUA_Achr10P...	Banana	mitochondrion	9.47	7.52

Protein Annotations

EnsemblPlants:GSMUA_Achr3P18890_001	EnsemblPlants:GSMUA_Achr3T18890_001	EnsemblPlantsGene:GSMUA_Achr3G18890_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	PFAM:PF00514	PFscan:PS50176	SEG:seg	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI00029595F7	UniProt:M0SFV5	MapMan:35.1	:	:

Description

spotted leaf 11, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G18890_001]

Coordinates

chr3:-:20277796..20278976

Molecular Weight (calculated)

37702.0 Da

IEP (calculated)

7.505

GRAVY (calculated)

-0.141

Length

359 amino acids

Sequence
(BLAST)

001: MEKENPSSNR YMGRNDSDTS GAFSDCNSDR SGEFPSSGSP TTSSSSIGGG GGGGGLHRLL VSYAVDYSHE VVRRLISDLE SPSATVESQR RAAMELRLLA
101: KHNPENRLRV AAAGAVGPLV ALVSHPDPQL QEHGVTAVLN LSLCDENKTL IAAAGAIRPL VCALSTGTPV ARENAACALL RLAQLDDLRT AIGRSGAIPP
201: LVALLESGGP RAKKDAATAL FALLASRENK TRAVEAGIVR SLLDLMADPD SGMVDKAAYV LNAVVEVAEG RAAAVEEDGI PVLVEMVEAG TSRQKDIAVR
301: SLLQICKESA VYRKMAAHEG AVPPLVALSQ SATKKSKEKA EALIELLRQP RRTAGDSRR

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.