Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021978_P001 | Maize | cytosol | 97.79 | 97.79 |
| Zm00001d006726_P001 | Maize | cytosol | 94.75 | 95.28 |
| Os07t0587500-01 | Rice | cytosol | 93.09 | 93.09 |
| TraesCS2B01G213900.1 | Wheat | cytosol | 91.16 | 91.41 |
| TraesCS2A01G193000.1 | Wheat | cytosol | 91.16 | 91.41 |
| TraesCS2D01G194400.1 | Wheat | cytosol | 90.61 | 90.86 |
| GSMUA_Achr4P03430_001 | Banana | cytosol | 52.49 | 70.63 |
| Bra040513.1-P | Field mustard | cytosol | 48.9 | 67.3 |
| CDY28679 | Canola | cytosol | 48.07 | 66.16 |
| KRH15451 | Soybean | cytosol | 49.17 | 65.68 |
| GSMUA_Achr6P07710_001 | Banana | cytosol | 63.54 | 64.43 |
| GSMUA_Achr10P... | Banana | cytosol | 64.92 | 63.17 |
| GSMUA_Achr3P18890_001 | Banana | cytosol | 61.88 | 62.4 |
| Solyc12g088360.1.1 | Tomato | cytosol | 46.69 | 61.45 |
| KRH05594 | Soybean | cytosol | 56.63 | 58.24 |
| Bra001006.1-P | Field mustard | plastid | 56.91 | 58.19 |
| CDX74298 | Canola | plastid | 56.63 | 57.91 |
| CDX91947 | Canola | plastid | 56.35 | 57.79 |
| Bra020360.1-P | Field mustard | cytosol | 56.35 | 57.79 |
| CDY32692 | Canola | peroxisome | 56.35 | 57.79 |
| AT3G01400.1 | Thale cress | cytosol | 56.35 | 57.46 |
| KRH52088 | Soybean | cytosol | 51.66 | 57.19 |
| PGSC0003DMT400027542 | Potato | cytosol | 55.8 | 56.74 |
| Solyc04g077850.2.1 | Tomato | cytosol | 55.8 | 56.74 |
| CDY02828 | Canola | cytosol | 55.25 | 56.5 |
| PGSC0003DMT400030161 | Potato | cytosol | 54.14 | 54.75 |
| GSMUA_Achr4P14130_001 | Banana | cytosol | 51.93 | 54.18 |
| GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 60.22 | 53.69 |
| AT5G58680.1 | Thale cress | cytosol | 52.76 | 53.5 |
| GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 59.12 | 51.69 |
| VIT_18s0001g09130.t01 | Wine grape | cytosol | 54.14 | 50.52 |
| Zm00001d003967_P001 | Maize | plastid | 60.5 | 48.67 |
| GSMUA_Achr5P16030_001 | Banana | cytosol | 62.71 | 48.2 |
| EER97453 | Sorghum | plastid | 44.75 | 34.62 |
| EER87680 | Sorghum | cytosol | 35.64 | 21.46 |
| EES06804 | Sorghum | cytosol | 25.97 | 20.26 |
| EES07310 | Sorghum | cytosol | 34.53 | 19.59 |
| EES01872 | Sorghum | cytosol | 41.44 | 18.63 |
| EES15482 | Sorghum | cytosol | 32.6 | 18.35 |
| OQU79384 | Sorghum | cytosol | 33.15 | 18.02 |
| OQU92820 | Sorghum | cytosol | 34.81 | 16.82 |
| KXG20946 | Sorghum | cytosol | 29.56 | 16.64 |
| OQU78182 | Sorghum | plastid | 28.18 | 15.02 |
| EES14396 | Sorghum | cytosol | 41.16 | 14.8 |
| KXG33626 | Sorghum | plastid | 27.9 | 14.39 |
| EES04812 | Sorghum | plastid | 26.8 | 13.31 |
| OQU80426 | Sorghum | endoplasmic reticulum, plasma membrane | 23.76 | 12.04 |
| KXG35540 | Sorghum | plasma membrane | 23.2 | 11.73 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | EntrezGene:8058381 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo |
| UniProt:C5XD38 | EnsemblPlants:EER97464 | ProteinID:EER97464 | ProteinID:EER97464.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| InterPro:IPR000225 | InterPro:IPR011989 | PFAM:PF00514 | PFscan:PS50176 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF64 |
| SMART:SM00185 | EnsemblPlantsGene:SORBI_3002G358600 | SUPFAM:SSF48371 | UniParc:UPI0001A837D0 | RefSeq:XP_002460943.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:72096041..72098767
Molecular Weight (calculated)
37728.2 Da
IEP (calculated)
6.262
GRAVY (calculated)
0.037
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDASTSPR RRSTSCYSDS GDSSCSEPFS ECGSDDLSFT PAAAAGIHRL LLSCAAEASE DAISSLVAEL ECPSPSLDSL RRAAMELRLL AKHNPDNRVR
101: IAAAGGVRPL VKLLSHADPL LQEHGVTALL NLSICDENKA IIVEAGAIRP LVHALKSAAS PAARENAACA LLRLSQLDGA SAAAIGRAGA VPLLVSLLET
201: GGARGKKDAA TALYALCSGA RENRQRAVEA GAVRPLLDLM ADPESGMVDK AAYVLHSLVS SAEGRAAAVE EGGIPVLVEM VEVGTSRQKE IATLSLLQIC
301: EDNTVYRTMV AREGAIPPLV ALSQSSSARP KLKTKAESLI EMLRQPRSPS LRARPAAVVA AE
101: IAAAGGVRPL VKLLSHADPL LQEHGVTALL NLSICDENKA IIVEAGAIRP LVHALKSAAS PAARENAACA LLRLSQLDGA SAAAIGRAGA VPLLVSLLET
201: GGARGKKDAA TALYALCSGA RENRQRAVEA GAVRPLLDLM ADPESGMVDK AAYVLHSLVS SAEGRAAAVE EGGIPVLVEM VEVGTSRQKE IATLSLLQIC
301: EDNTVYRTMV AREGAIPPLV ALSQSSSARP KLKTKAESLI EMLRQPRSPS LRARPAAVVA AE
001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.