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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g088360.1.1 Tomato cytosol 76.26 99.27
PGSC0003DMT400027542 Potato cytosol 85.75 86.24
KRH15451 Soybean cytosol 61.45 81.18
CDY28679 Canola cytosol 58.66 79.85
Bra040513.1-P Field mustard cytosol 58.38 79.47
KRH05594 Soybean cytosol 77.93 79.26
AT3G01400.1 Thale cress cytosol 76.54 77.18
CDX74298 Canola plastid 75.14 75.99
Bra001006.1-P Field mustard plastid 74.58 75.42
CDX91947 Canola plastid 73.74 74.79
CDY02828 Canola cytosol 70.95 71.75
CDY32692 Canola peroxisome 70.11 71.1
Bra020360.1-P Field mustard cytosol 70.11 71.1
VIT_18s0001g09130.t01 Wine grape cytosol 76.54 70.62
KRH52088 Soybean cytosol 63.97 70.03
AT5G58680.1 Thale cress cytosol 68.72 68.91
GSMUA_Achr4P03430_001 Banana cytosol 46.37 61.71
GSMUA_Achr6P07710_001 Banana cytosol 57.26 57.42
GSMUA_Achr3P18890_001 Banana cytosol 56.98 56.82
GSMUA_Achr10P... Banana cytosol 57.54 55.38
Os07t0587500-01 Rice cytosol 55.31 54.7
Zm00001d006726_P001 Maize cytosol 54.47 54.17
EER97464 Sorghum cytosol 54.75 54.14
Zm00001d021978_P001 Maize cytosol 54.47 53.87
TraesCS2B01G213900.1 Wheat cytosol 53.63 53.19
TraesCS2A01G193000.1 Wheat cytosol 53.35 52.91
TraesCS2D01G194400.1 Wheat cytosol 53.07 52.63
GSMUA_Achr4P14130_001 Banana cytosol 46.65 48.13
GSMUA_Achr4P10960_001 Banana endoplasmic reticulum 54.47 48.03
GSMUA_Achr7P26200_001 Banana extracellular, golgi 53.07 45.89
GSMUA_Achr5P16030_001 Banana cytosol 57.26 43.52
PGSC0003DMT400034564 Potato nucleus, plastid 46.37 36.24
Os03t0435300-00 Rice cytosol 40.22 36.0
Zm00001d003967_P001 Maize plastid 44.69 35.56
PGSC0003DMT400060674 Potato plastid 44.69 35.48
PGSC0003DMT400027406 Potato cytosol 20.67 27.72
PGSC0003DMT400082693 Potato cytosol 17.6 25.82
PGSC0003DMT400016998 Potato cytosol 28.21 22.49
PGSC0003DMT400026700 Potato cytosol 46.09 21.21
PGSC0003DMT400046295 Potato cytosol 48.32 21.07
PGSC0003DMT400039084 Potato cytosol 25.98 20.99
PGSC0003DMT400015349 Potato cytosol 37.43 20.71
PGSC0003DMT400019235 Potato cytosol 35.75 20.51
PGSC0003DMT400011486 Potato cytosol 20.11 20.17
PGSC0003DMT400078473 Potato cytosol 36.31 20.0
PGSC0003DMT400001049 Potato cytosol 36.59 19.73
PGSC0003DMT400078166 Potato cytosol 36.03 19.52
PGSC0003DMT400090858 Potato cytosol, mitochondrion 22.07 17.36
PGSC0003DMT400025648 Potato cytosol 30.45 16.8
PGSC0003DMT400075612 Potato cytosol 30.17 16.74
PGSC0003DMT400077205 Potato cytosol 31.01 16.35
PGSC0003DMT400095861 Potato cytosol, plasma membrane 25.42 16.25
PGSC0003DMT400073254 Potato cytosol 28.77 14.23
PGSC0003DMT400062931 Potato cytosol 25.42 13.34
PGSC0003DMT400071349 Potato plastid 21.79 11.27
Protein Annotations
EnsemblPlants:PGSC0003DMT400030161EnsemblPlantsGene:PGSC0003DMG400011545EntrezGene:102590611Gene3D:1.25.10.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:ARM-likeInterPro:ARM-type_foldInterPro:ArmadilloInterPro:IPR000225InterPro:IPR011989
PANTHER:PTHR23315PANTHER:PTHR23315:SF64PFAM:PF00514PFscan:PS50176PGSC:PGSC0003DMG400011545RefSeq:XP_006342665.1
SMART:SM00185SUPFAM:SSF48371UniParc:UPI0002962FE0UniProt:M1ATT8MapMan:35.1:
Description
E3 ubiquitin ligase PUB14 [Source:PGSC_GENE;Acc:PGSC0003DMG400011545]
Coordinates
chr12:+:56230648..56233667
Molecular Weight (calculated)
38416.4 Da
IEP (calculated)
5.634
GRAVY (calculated)
-0.013
Length
358 amino acids
Sequence
(BLAST)
001: METEVQSNFT YMGRTFTGLG INESSSAFSD CNSDRSGEFP TTSSQSRRLL IACASDNYNS DELIQQLVSD LESNSIDVQK QAAMEIRLLA KNKPENRLKI
101: ARAGAIKPLI SLISSTDLQL QEYGVTAVLN LSLCDENKEL IAESGAIKPL VRALKIGNST AKENSACALL RLSQIEENKI AIGRSGAIPP LVNLLEAGNF
201: RGKKDASTAL FCLCTVKENK IRAVQAGVMK PLVELMADFS SNMVDKSAFV MSVLISMVEA RAAVVEEGGI PVLVEIVEVG SQRQKEIAAA ILLQLCEDSV
301: CYRTMVAREG AIPPLVALSQ SGTNRAKQKA ETLIGLLRQP RSGNAAATTP ARGSDVSF
Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)
001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.