Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020360.1-P | Field mustard | cytosol | 97.45 | 97.45 |
| CDY02828 | Canola | cytosol | 95.75 | 95.48 |
| CDY28679 | Canola | cytosol | 61.19 | 82.13 |
| CDX74298 | Canola | plastid | 78.47 | 78.25 |
| CDX91947 | Canola | plastid | 77.62 | 77.62 |
| KRH15451 | Soybean | cytosol | 58.07 | 75.65 |
| AT5G58680.1 | Thale cress | cytosol | 76.2 | 75.35 |
| Solyc12g088360.1.1 | Tomato | cytosol | 58.07 | 74.55 |
| KRH05594 | Soybean | cytosol | 72.8 | 73.01 |
| Solyc04g077850.2.1 | Tomato | cytosol | 72.8 | 72.19 |
| PGSC0003DMT400027542 | Potato | cytosol | 72.52 | 71.91 |
| PGSC0003DMT400030161 | Potato | cytosol | 71.1 | 70.11 |
| KRH52088 | Soybean | cytosol | 61.76 | 66.67 |
| VIT_18s0001g09130.t01 | Wine grape | cytosol | 69.41 | 63.14 |
| GSMUA_Achr4P03430_001 | Banana | cytosol | 47.59 | 62.45 |
| GSMUA_Achr3P18890_001 | Banana | cytosol | 58.92 | 57.94 |
| GSMUA_Achr6P07710_001 | Banana | cytosol | 58.36 | 57.7 |
| Os07t0587500-01 | Rice | cytosol | 58.36 | 56.91 |
| EER97464 | Sorghum | cytosol | 57.79 | 56.35 |
| Zm00001d021978_P001 | Maize | cytosol | 57.51 | 56.08 |
| TraesCS2D01G194400.1 | Wheat | cytosol | 57.22 | 55.96 |
| TraesCS2B01G213900.1 | Wheat | cytosol | 57.22 | 55.96 |
| TraesCS2A01G193000.1 | Wheat | cytosol | 56.94 | 55.68 |
| Zm00001d006726_P001 | Maize | cytosol | 56.66 | 55.56 |
| GSMUA_Achr10P... | Banana | cytosol | 57.51 | 54.57 |
| GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 56.94 | 49.51 |
| GSMUA_Achr4P14130_001 | Banana | cytosol | 47.88 | 48.7 |
| GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 54.96 | 46.86 |
| GSMUA_Achr5P16030_001 | Banana | cytosol | 56.94 | 42.68 |
| Os03t0435300-00 | Rice | cytosol | 44.48 | 39.25 |
| CDX90518 | Canola | plastid | 47.88 | 37.14 |
| CDY09688 | Canola | cytosol | 47.31 | 36.78 |
| Zm00001d003967_P001 | Maize | plastid | 45.89 | 36.0 |
| CDX74050 | Canola | cytosol | 28.33 | 21.93 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 37.39 | 21.71 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 37.39 | 21.67 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.98 | 21.6 |
| CDY71737 | Canola | cytosol | 27.76 | 21.21 |
| CDY12497 | Canola | cytosol | 35.69 | 21.11 |
| CDY08002 | Canola | cytosol | 27.2 | 21.1 |
| CDY28059 | Canola | cytosol | 27.48 | 21.0 |
| CDX72769 | Canola | cytosol | 35.41 | 20.42 |
| CDX78262 | Canola | cytosol | 40.51 | 20.37 |
| CDX76873 | Canola | cytosol, plastid | 43.06 | 20.35 |
| CDX96295 | Canola | cytosol, plasma membrane | 35.13 | 20.13 |
| CDX73449 | Canola | cytosol | 39.09 | 19.6 |
| CDX78273 | Canola | cytosol | 35.13 | 19.56 |
| CDY02891 | Canola | cytosol | 40.79 | 19.54 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 40.51 | 19.38 |
| CDY18649 | Canola | cytosol, plastid | 38.53 | 19.1 |
| CDY68352 | Canola | cytosol | 24.65 | 19.08 |
| CDX81323 | Canola | cytosol, plastid | 38.81 | 18.95 |
| CDY57440 | Canola | cytosol | 34.84 | 18.66 |
| CDY38506 | Canola | cytosol | 23.8 | 18.42 |
| CDY31736 | Canola | cytosol | 33.14 | 18.22 |
| CDY12838 | Canola | cytosol | 35.69 | 18.03 |
| CDX68379 | Canola | cytosol | 33.43 | 17.93 |
| CDX77213 | Canola | cytosol | 32.58 | 17.88 |
| CDY68037 | Canola | cytosol | 33.14 | 17.86 |
| CDX86080 | Canola | cytosol | 33.14 | 17.84 |
| CDX99112 | Canola | cytosol | 32.86 | 17.71 |
| CDX95193 | Canola | cytosol | 32.86 | 17.71 |
| CDX68380 | Canola | cytosol | 24.36 | 16.17 |
| CDX94661 | Canola | plastid | 30.03 | 14.91 |
| CDX90186 | Canola | mitochondrion | 29.75 | 14.73 |
| CDY48332 | Canola | mitochondrion, plastid | 29.18 | 14.63 |
| CDX70810 | Canola | cytosol | 19.55 | 14.62 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 42.78 | 14.62 |
| CDY37666 | Canola | cytosol, plastid | 27.2 | 14.52 |
| CDY43686 | Canola | plastid | 26.91 | 14.37 |
| CDX99816 | Canola | plastid | 29.46 | 14.36 |
| CDY43332 | Canola | mitochondrion | 29.18 | 14.33 |
| CDY51235 | Canola | extracellular, golgi | 20.96 | 14.26 |
| CDY38931 | Canola | cytosol | 24.08 | 13.82 |
| CDX73439 | Canola | plastid | 35.13 | 13.76 |
| CDY04747 | Canola | cytosol, golgi | 15.86 | 12.7 |
| CDX71307 | Canola | cytosol | 23.8 | 12.48 |
| CDY31406 | Canola | cytosol | 23.8 | 12.46 |
| CDX93411 | Canola | mitochondrion | 22.66 | 11.46 |
| CDY55050 | Canola | cytosol | 22.38 | 11.35 |
| CDY54132 | Canola | cytosol | 21.53 | 11.18 |
| CDY24520 | Canola | cytosol | 20.96 | 10.98 |
| CDX70805 | Canola | cytosol | 22.38 | 5.13 |
| CDY51234 | Canola | cytosol | 22.1 | 4.71 |
| CDY04344 | Canola | cytosol | 0.57 | 0.63 |
| CDY04342 | Canola | cytosol | 0.57 | 0.6 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | UniProt:A0A078H5F4 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo |
| EnsemblPlants:CDY32692 | ProteinID:CDY32692 | ProteinID:CDY32692.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00052735001 | InterPro:IPR000225 | InterPro:IPR011989 | PFAM:PF00514 | PFscan:PS50176 | PANTHER:PTHR23315 |
| PANTHER:PTHR23315:SF64 | SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI0004EE9495 | SEG:seg | : |
Description
BnaA02g07540DBnaA02g07540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5F4]
Coordinates
chrLK032298:+:209895..211123
Molecular Weight (calculated)
38210.0 Da
IEP (calculated)
7.788
GRAVY (calculated)
-0.198
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MENRTGLTYM NRKLSGLTVT DDSSSAFSDC NSDRSGEFPP SSSENRRLFL SRAAENPDDL IRYLVSHLDS SSSSVDEQKQ AAMEIRLLTK DKPENRIKLA
101: RAGAIKPLIS LVSSSDAQLQ EHGVTAVLNL SLCDENKELI ASSGAIKPLV RALKSGTPTA KENAACALLR LSQIEDNKIA IGRSGAIPHL VSLLETGGFR
201: GKKDAATALY SLCSAKENKT RAVEAGVVKP LVELMADFDS NMVDKAAYVM NLLMSAAEAK PAVVEEGGVP VLVEIVEVGT QRQKEMGVSI LLQLCEESVV
301: YRTMVAREGA IAPVVALSQS SKSRAKLKAE ALIEILRRPR QQQQQQQLDC NRI
101: RAGAIKPLIS LVSSSDAQLQ EHGVTAVLNL SLCDENKELI ASSGAIKPLV RALKSGTPTA KENAACALLR LSQIEDNKIA IGRSGAIPHL VSLLETGGFR
201: GKKDAATALY SLCSAKENKT RAVEAGVVKP LVELMADFDS NMVDKAAYVM NLLMSAAEAK PAVVEEGGVP VLVEIVEVGT QRQKEMGVSI LLQLCEESVV
301: YRTMVAREGA IAPVVALSQS SKSRAKLKAE ALIEILRRPR QQQQQQQLDC NRI
001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.