Subcellular Localization
min:
: max
Winner_takes_all: cytosol, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024559.1-P | Field mustard | cytosol, plasma membrane | 99.84 | 99.67 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 99.51 | 99.34 |
| CDY04747 | Canola | cytosol, golgi | 71.55 | 98.64 |
| AT1G23030.1 | Thale cress | cytosol | 90.95 | 90.36 |
| CDY12497 | Canola | cytosol | 86.35 | 87.94 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 85.03 | 87.93 |
| CDX96295 | Canola | cytosol, plasma membrane | 77.14 | 76.14 |
| CDX72769 | Canola | cytosol | 75.82 | 75.33 |
| KRH50347 | Soybean | nucleus | 63.65 | 59.17 |
| KRG89279 | Soybean | cytosol | 63.32 | 59.14 |
| VIT_01s0011g04770.t01 | Wine grape | cytosol | 62.01 | 59.0 |
| PGSC0003DMT400015349 | Potato | cytosol | 61.18 | 57.5 |
| Solyc04g007640.2.1 | Tomato | cytosol | 60.53 | 56.88 |
| PGSC0003DMT400078473 | Potato | cytosol | 59.21 | 55.38 |
| Solyc05g008230.2.1 | Tomato | cytosol | 58.88 | 55.08 |
| Zm00001d000381_P001 | Maize | cytosol | 51.64 | 49.22 |
| EES07310 | Sorghum | cytosol | 51.48 | 49.06 |
| TraesCS6D01G274500.1 | Wheat | cytosol | 50.99 | 48.36 |
| TraesCS6A01G293600.1 | Wheat | cytosol | 50.99 | 48.36 |
| TraesCS6B01G324000.1 | Wheat | cytosol | 50.99 | 48.21 |
| Os02t0732200-01 | Rice | cytosol | 50.49 | 48.19 |
| CDY28679 | Canola | cytosol | 20.23 | 46.77 |
| GSMUA_Achr9P15600_001 | Banana | cytosol | 46.38 | 41.72 |
| CDX86080 | Canola | cytosol | 44.24 | 41.01 |
| CDX99112 | Canola | cytosol | 44.08 | 40.92 |
| CDX68380 | Canola | cytosol | 35.53 | 40.6 |
| CDX68379 | Canola | cytosol | 43.91 | 40.58 |
| CDX78273 | Canola | cytosol | 42.11 | 40.38 |
| CDY31736 | Canola | cytosol | 42.11 | 39.88 |
| CDX77213 | Canola | cytosol | 41.61 | 39.35 |
| HORVU6Hr1G073280.1 | Barley | cytosol | 50.82 | 38.48 |
| CDX91947 | Canola | plastid | 21.71 | 37.39 |
| CDY32692 | Canola | peroxisome | 21.71 | 37.39 |
| CDX74298 | Canola | plastid | 21.55 | 37.01 |
| CDY02828 | Canola | cytosol | 21.22 | 36.44 |
| CDY71737 | Canola | cytosol | 26.64 | 35.06 |
| CDY28059 | Canola | cytosol | 26.64 | 35.06 |
| CDX74050 | Canola | cytosol | 25.99 | 34.65 |
| CDY08002 | Canola | cytosol | 25.33 | 33.85 |
| CDX95193 | Canola | cytosol | 35.53 | 32.98 |
| CDY68037 | Canola | cytosol | 35.36 | 32.82 |
| CDY68352 | Canola | cytosol | 22.2 | 29.61 |
| CDY38506 | Canola | cytosol | 21.55 | 28.73 |
| CDX73439 | Canola | plastid | 41.78 | 28.19 |
| CDY18649 | Canola | cytosol, plastid | 32.57 | 27.81 |
| CDX90186 | Canola | mitochondrion | 32.57 | 27.77 |
| CDX94661 | Canola | plastid | 32.4 | 27.71 |
| CDY37666 | Canola | cytosol, plastid | 29.93 | 27.53 |
| CDY43686 | Canola | plastid | 29.93 | 27.53 |
| CDX81323 | Canola | cytosol, plastid | 32.73 | 27.52 |
| CDX90518 | Canola | plastid | 20.56 | 27.47 |
| CDX76873 | Canola | cytosol, plastid | 33.55 | 27.31 |
| CDY48332 | Canola | mitochondrion, plastid | 31.41 | 27.13 |
| CDY43332 | Canola | mitochondrion | 32.07 | 27.12 |
| CDY09688 | Canola | cytosol | 20.23 | 27.09 |
| CDX99816 | Canola | plastid | 32.07 | 26.93 |
| CDX73449 | Canola | cytosol | 29.93 | 25.85 |
| CDX78262 | Canola | cytosol | 29.77 | 25.78 |
| CDY57440 | Canola | cytosol | 27.8 | 25.64 |
| CDY12838 | Canola | cytosol | 29.28 | 25.46 |
| CDX71307 | Canola | cytosol | 27.8 | 25.11 |
| CDY31406 | Canola | cytosol | 27.8 | 25.07 |
| CDY02891 | Canola | cytosol | 29.93 | 24.69 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 29.93 | 24.66 |
| CDY38931 | Canola | cytosol | 24.51 | 24.23 |
| CDX70810 | Canola | cytosol | 18.42 | 23.73 |
| CDX93411 | Canola | mitochondrion | 26.32 | 22.92 |
| CDY55050 | Canola | cytosol | 26.15 | 22.84 |
| CDY51235 | Canola | extracellular, golgi | 19.24 | 22.54 |
| CDY24520 | Canola | cytosol | 24.18 | 21.81 |
| CDY54132 | Canola | cytosol | 24.01 | 21.47 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 33.39 | 19.65 |
| CDY04344 | Canola | cytosol | 9.21 | 17.55 |
| CDY04342 | Canola | cytosol | 9.54 | 17.42 |
| CDX70805 | Canola | cytosol | 19.74 | 7.79 |
| CDY51234 | Canola | cytosol | 19.08 | 7.0 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.2.1.5.2.1 | Gene3D:3.30.40.10 | GO:A0A078G8T0 | UniProt:A0A078G8T0 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Armadillo | EnsemblPlants:CDY21412 | ProteinID:CDY21412 | ProteinID:CDY21412.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00015797001 |
| InterPro:IPR000225 | InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | PFAM:PF00514 | PFAM:PF04564 |
| PFscan:PS50176 | PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF52 | SMART:SM00185 | SMART:SM00504 |
| SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EDDA7C | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g30150DRING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A078G8T0]
Coordinates
chrLK032120:+:551145..553755
Molecular Weight (calculated)
66614.2 Da
IEP (calculated)
8.186
GRAVY (calculated)
-0.152
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVNVSPAS LLELIAEIAE IPINAGVFKK DCADLTRRVC LLTHLVEEIR DSNPVDSAAA SSSENDWWSD LVVGLQAAKR LLSSATRFQA RDSSDGAVKR
101: ISFQLQCITW RLEKALSNLP YDLYDISDEV GEQVELARSQ LRRAMQRYGS LNSNKFLNGL SEPMERDAFS NVKIKAEEEK LEGISETVPF GEEKKQLRKS
201: SSISLAFYLS KDADTDRLDK MVTKNTDESK KSDKLTIPVD FLCPVSLELM KDPVIVATGQ TYERAYIQRW IDCGNLTCPK TQQKLENFTL TPNYVLRSLI
301: SRWCAEHNIE QPAGYINGRS RNRGDMSVIK ALVHKLSSRS VEERRNAVSE IRSLSKRSTD NRILIAEAGA IPVLVNLLTS EDVATQENAI TCVLNLSIYD
401: NNKELIMFAG AVTSIVQVLR AGTMEARENA AATLFSLSLA DENKIIIGGS GAIPALVDLL ENGTPRGKKD AATALFNLCI YQGNKGRAVR AGIVPALVKM
501: LSDSSSHRMV DEALTILSVL ASNLDAKAAI VKANTLPALI GILQTGQARN RENAAAILLS LCKRDTEKLV SIGRLGAVVP LMDLSNNGTE RGKRKATSLL
601: ELLRKACQ
101: ISFQLQCITW RLEKALSNLP YDLYDISDEV GEQVELARSQ LRRAMQRYGS LNSNKFLNGL SEPMERDAFS NVKIKAEEEK LEGISETVPF GEEKKQLRKS
201: SSISLAFYLS KDADTDRLDK MVTKNTDESK KSDKLTIPVD FLCPVSLELM KDPVIVATGQ TYERAYIQRW IDCGNLTCPK TQQKLENFTL TPNYVLRSLI
301: SRWCAEHNIE QPAGYINGRS RNRGDMSVIK ALVHKLSSRS VEERRNAVSE IRSLSKRSTD NRILIAEAGA IPVLVNLLTS EDVATQENAI TCVLNLSIYD
401: NNKELIMFAG AVTSIVQVLR AGTMEARENA AATLFSLSLA DENKIIIGGS GAIPALVDLL ENGTPRGKKD AATALFNLCI YQGNKGRAVR AGIVPALVKM
501: LSDSSSHRMV DEALTILSVL ASNLDAKAAI VKANTLPALI GILQTGQARN RENAAAILLS LCKRDTEKLV SIGRLGAVVP LMDLSNNGTE RGKRKATSLL
601: ELLRKACQ
001: MAGGIVSPAS LLDLIADIVE IPLNTGMFKK DCADLTRRVC LLTHLLEEIR DSTPIDSAAS SSSENDWWSD LVVGLQAAKR LLSTARFQAR DSSDGAAKRI
101: SFQFQCVTWK LEKALSNLPY DLYDISDEVG EQVELARSQL RRAMQRYGSL NSNKFSSALS EPMERDGFSN VIKIKAEEKL ESVSETLHFG EEEEKQSSPP
201: LRRSSSISLA YYLSKDADTD RLDKMVNKNT DESKKSDKLT IPVDFLCPVS LELMKDPVIV ATGQTYERAY IQRWIDCGNL TCPKTQQKLE NFTLTPNYVL
301: RSLISRWCAE HNIEQPAGYI NGRTKNSGDM SVIRALVQRL SSRSTEDRRN AVSEIRSLSK RSTDNRILIA EAGAIPVLVN LLTSEDVATQ ENAITCVLNL
401: SIYENNKELI MFAGAVTSIV QVLRAGTMEA RENAAATLFS LSLADENKII IGGSGAIPAL VDLLENGTPR GKKDAATALF NLCIYHGNKG RAVRAGIVTA
501: LVKMLSDSTR HRMVDEALTI LSVLANNQDA KSAIVKANTL PALIGILQTD QTRNRENAAA ILLSLCKRDT EKLITIGRLG AVVPLMDLSK NGTERGKRKA
601: ISLLELLRKA CQ
101: SFQFQCVTWK LEKALSNLPY DLYDISDEVG EQVELARSQL RRAMQRYGSL NSNKFSSALS EPMERDGFSN VIKIKAEEKL ESVSETLHFG EEEEKQSSPP
201: LRRSSSISLA YYLSKDADTD RLDKMVNKNT DESKKSDKLT IPVDFLCPVS LELMKDPVIV ATGQTYERAY IQRWIDCGNL TCPKTQQKLE NFTLTPNYVL
301: RSLISRWCAE HNIEQPAGYI NGRTKNSGDM SVIRALVQRL SSRSTEDRRN AVSEIRSLSK RSTDNRILIA EAGAIPVLVN LLTSEDVATQ ENAITCVLNL
401: SIYENNKELI MFAGAVTSIV QVLRAGTMEA RENAAATLFS LSLADENKII IGGSGAIPAL VDLLENGTPR GKKDAATALF NLCIYHGNKG RAVRAGIVTA
501: LVKMLSDSTR HRMVDEALTI LSVLANNQDA KSAIVKANTL PALIGILQTD QTRNRENAAA ILLSLCKRDT EKLITIGRLG AVVPLMDLSK NGTERGKRKA
601: ISLLELLRKA CQ
Arabidopsis Description
PUB11RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178WCR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.