Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68037 | Canola | cytosol | 97.86 | 97.86 |
| AT5G42340.1 | Thale cress | cytosol | 86.41 | 85.76 |
| KRH40395 | Soybean | cytosol | 61.07 | 62.99 |
| KRH00831 | Soybean | cytosol | 60.46 | 62.36 |
| VIT_18s0001g14180.t01 | Wine grape | cytosol | 60.15 | 57.6 |
| Solyc12g094610.1.1 | Tomato | cytosol | 47.18 | 57.54 |
| PGSC0003DMT400025648 | Potato | cytosol | 56.64 | 57.16 |
| KRH33490 | Soybean | cytosol | 45.8 | 57.14 |
| Solyc04g082440.2.1 | Tomato | cytosol | 56.34 | 56.86 |
| PGSC0003DMT400075612 | Potato | cytosol | 55.27 | 56.12 |
| GSMUA_Achr4P04900_001 | Banana | cytosol | 44.73 | 55.49 |
| GSMUA_Achr4P05030_001 | Banana | cytosol | 43.82 | 54.77 |
| Os08t0481200-01 | Rice | cytosol | 51.3 | 52.34 |
| KXG20946 | Sorghum | cytosol | 51.15 | 52.1 |
| TraesCS7B01G186600.1 | Wheat | cytosol | 50.99 | 51.86 |
| Zm00001d014845_P001 | Maize | cytosol | 50.53 | 51.64 |
| TraesCS7A01G293900.1 | Wheat | cytosol | 50.69 | 51.55 |
| TraesCS7D01G289800.1 | Wheat | cytosol | 50.69 | 51.55 |
| HORVU7Hr1G061800.2 | Barley | cytosol | 50.69 | 51.55 |
| TraesCS7D01G536300.1 | Wheat | cytosol | 50.23 | 51.01 |
| TraesCS7A01G549700.1 | Wheat | cytosol | 50.08 | 50.77 |
| HORVU7Hr1G121810.1 | Barley | cytosol | 49.62 | 50.7 |
| EES15482 | Sorghum | cytosol | 49.16 | 50.08 |
| Zm00001d031263_P001 | Maize | cytosol | 48.7 | 49.46 |
| TraesCS7B01G473200.1 | Wheat | cytosol | 50.08 | 48.66 |
| Os06t0726900-00 | Rice | cytosol | 26.56 | 45.79 |
| CDX68380 | Canola | cytosol | 33.13 | 40.79 |
| CDY28679 | Canola | cytosol | 16.34 | 40.68 |
| CDX99112 | Canola | cytosol | 39.85 | 39.85 |
| CDX86080 | Canola | cytosol | 39.85 | 39.79 |
| CDX78273 | Canola | cytosol | 38.47 | 39.75 |
| CDX68379 | Canola | cytosol | 39.54 | 39.36 |
| CDX77213 | Canola | cytosol | 38.17 | 38.88 |
| CDY31736 | Canola | cytosol | 38.02 | 38.78 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.37 | 36.05 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 33.13 | 35.63 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 32.98 | 35.53 |
| CDX74298 | Canola | plastid | 18.93 | 35.03 |
| CDY12497 | Canola | cytosol | 31.76 | 34.84 |
| CDX96295 | Canola | cytosol, plasma membrane | 32.37 | 34.42 |
| CDX91947 | Canola | plastid | 18.47 | 34.28 |
| CDX72769 | Canola | cytosol | 31.45 | 33.66 |
| CDY32692 | Canola | peroxisome | 17.71 | 32.86 |
| CDX74050 | Canola | cytosol | 22.75 | 32.68 |
| CDY04747 | Canola | cytosol, golgi | 21.98 | 32.65 |
| CDY02828 | Canola | cytosol | 17.56 | 32.49 |
| CDY71737 | Canola | cytosol | 22.9 | 32.47 |
| CDY28059 | Canola | cytosol | 22.6 | 32.03 |
| CDY08002 | Canola | cytosol | 21.98 | 31.65 |
| CDY68352 | Canola | cytosol | 20.46 | 29.39 |
| CDY38506 | Canola | cytosol | 20.31 | 29.17 |
| CDX76873 | Canola | cytosol, plastid | 32.52 | 28.51 |
| CDY02891 | Canola | cytosol | 31.6 | 28.09 |
| CDX90186 | Canola | mitochondrion | 30.53 | 28.05 |
| CDX73449 | Canola | cytosol | 30.08 | 27.98 |
| CDY18649 | Canola | cytosol, plastid | 30.38 | 27.95 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 31.45 | 27.91 |
| CDX73439 | Canola | plastid | 38.17 | 27.75 |
| CDX78262 | Canola | cytosol | 29.62 | 27.64 |
| CDY48332 | Canola | mitochondrion, plastid | 29.62 | 27.56 |
| CDX81323 | Canola | cytosol, plastid | 30.38 | 27.52 |
| CDY43332 | Canola | mitochondrion | 30.08 | 27.4 |
| CDX94661 | Canola | plastid | 29.16 | 26.86 |
| CDX99816 | Canola | plastid | 29.62 | 26.8 |
| CDY57440 | Canola | cytosol | 26.41 | 26.25 |
| CDX71307 | Canola | cytosol | 26.87 | 26.15 |
| CDY31406 | Canola | cytosol | 26.72 | 25.96 |
| CDX90518 | Canola | plastid | 18.02 | 25.93 |
| CDY12838 | Canola | cytosol | 27.33 | 25.61 |
| CDY09688 | Canola | cytosol | 17.71 | 25.55 |
| CDY37666 | Canola | cytosol, plastid | 25.19 | 24.96 |
| CDY43686 | Canola | plastid | 24.89 | 24.66 |
| CDX70810 | Canola | cytosol | 17.56 | 24.36 |
| CDY38931 | Canola | cytosol | 22.6 | 24.07 |
| CDY24520 | Canola | cytosol | 23.05 | 22.4 |
| CDY54132 | Canola | cytosol | 23.21 | 22.35 |
| CDY51235 | Canola | extracellular, golgi | 16.95 | 21.39 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 32.67 | 20.72 |
| CDY55050 | Canola | cytosol | 21.98 | 20.69 |
| CDX93411 | Canola | mitochondrion | 21.98 | 20.63 |
| CDY04344 | Canola | cytosol | 9.01 | 18.5 |
| CDY04342 | Canola | cytosol | 9.01 | 17.72 |
| CDX70805 | Canola | cytosol | 17.56 | 7.46 |
| CDY51234 | Canola | cytosol | 17.4 | 6.88 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078E749 | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Armadillo | EnsemblPlants:CDX95193 | ProteinID:CDX95193 | ProteinID:CDX95193.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00100780001 | InterPro:IPR000225 |
| InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | PFAM:PF00514 | PFAM:PF04564 | PFscan:PS50176 |
| PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF49 | SMART:SM00185 | SMART:SM00504 | SUPFAM:SSF48371 |
| SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EF487F | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaC09g16770D
Coordinates
chrLK031887:-:469813..472310
Molecular Weight (calculated)
73337.4 Da
IEP (calculated)
4.729
GRAVY (calculated)
-0.209
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVMDLDEEA TREGENIEEV VNAEESIDDE AVDIHEEEVG DVKDDLVGKI ITTIEFLDQI SDYRRTQQKE CFNLVRRLKI LIPFMDEIRG FEFPSPESCM
101: HFLNRLRKVI LAARKLLETC NNGSKIFLAL DSELIMTRFH SIYEKLNRVL VKTPFDELGI SDEVKDEVGS LCKQLKKARR RTDTQDIELA VDMMVMFSKT
201: DPRNADSAII ERLAKKLELQ TMEDLKTETI AIKTLVQEKG GLSIETKQHI IELLNKFKKL QGVEATDVLY EPVIKKSTSL ILPHEFLCPI TLEIMQDPVI
301: IATGQTYEKE GIQKWFDAGH KTCPKTGQTL DHLSLAPNYA LKNIILQWCE KNNFKIPEKE TSLHSENDSE EQKDEVSLLV EALSSSQLEE QRASVKQMRL
401: LAKENPENRV LIANAGAIPL LVQLLSYPDS GIQENAVTTL LNLSIDETNK KLISDEGAIP DIIEILQNGN REARENSAAA LFSLSMLDEN KVTIGLSNGI
501: PPLVELLQHG TSRGKKDAFT ALFNLSLNSA NKGRAIDAGI VQPLLQLLKD RNLGMIDEAL SILLLLVSHP EGRQAIGQLS FIETLVDFIR QGTPKNKECA
601: ASVLLELGSN NSSFILAALQ FGVYEYLVDI TSSGTNRAQR KANALIQLIS KSEQI
101: HFLNRLRKVI LAARKLLETC NNGSKIFLAL DSELIMTRFH SIYEKLNRVL VKTPFDELGI SDEVKDEVGS LCKQLKKARR RTDTQDIELA VDMMVMFSKT
201: DPRNADSAII ERLAKKLELQ TMEDLKTETI AIKTLVQEKG GLSIETKQHI IELLNKFKKL QGVEATDVLY EPVIKKSTSL ILPHEFLCPI TLEIMQDPVI
301: IATGQTYEKE GIQKWFDAGH KTCPKTGQTL DHLSLAPNYA LKNIILQWCE KNNFKIPEKE TSLHSENDSE EQKDEVSLLV EALSSSQLEE QRASVKQMRL
401: LAKENPENRV LIANAGAIPL LVQLLSYPDS GIQENAVTTL LNLSIDETNK KLISDEGAIP DIIEILQNGN REARENSAAA LFSLSMLDEN KVTIGLSNGI
501: PPLVELLQHG TSRGKKDAFT ALFNLSLNSA NKGRAIDAGI VQPLLQLLKD RNLGMIDEAL SILLLLVSHP EGRQAIGQLS FIETLVDFIR QGTPKNKECA
601: ASVLLELGSN NSSFILAALQ FGVYEYLVDI TSSGTNRAQR KANALIQLIS KSEQI
001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI
Arabidopsis Description
PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.