Factsheet for Zm00001d031263_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15482	Sorghum	cytosol	90.54	90.82
Os08t0481200-01	Rice	cytosol	80.16	80.53
TraesCS7D01G289800.1	Wheat	cytosol	78.29	78.42
TraesCS7B01G186600.1	Wheat	cytosol	78.14	78.26
TraesCS7A01G293900.1	Wheat	cytosol	78.14	78.26
HORVU7Hr1G061800.2	Barley	cytosol	77.83	77.95
Zm00001d014845_P001	Maize	cytosol	68.68	69.11
GSMUA_Achr4P05030_001	Banana	cytosol	49.61	61.07
GSMUA_Achr4P04900_001	Banana	cytosol	49.3	60.23
VIT_03s0038g03660.t01	Wine grape	cytosol	54.42	54.76
KRH40395	Soybean	cytosol	52.09	52.91
KRH00831	Soybean	cytosol	51.32	52.13
PGSC0003DMT400025648	Potato	cytosol	52.25	51.93
Solyc04g082440.2.1	Tomato	cytosol	51.94	51.62
CDY68037	Canola	cytosol	49.61	48.85
Solyc12g094610.1.1	Tomato	cytosol	40.62	48.79
Bra027977.1-P	Field mustard	cytosol	49.3	48.77
CDX95193	Canola	cytosol	49.46	48.7
VIT_18s0001g14180.t01	Wine grape	cytosol	51.47	48.54
PGSC0003DMT400075612	Potato	cytosol	48.06	48.06
AT5G42340.1	Thale cress	cytosol	48.84	47.73
KRH33490	Soybean	cytosol	38.45	47.24
Zm00001d045632_P004	Maize	cytosol, mitochondrion	36.74	37.62
Zm00001d000381_P001	Maize	cytosol	35.5	35.89
Zm00001d041548_P002	Maize	cytosol	37.36	35.86
Zm00001d030732_P001	Maize	cytosol	36.74	35.64
Zm00001d028623_P001	Maize	cytosol	38.91	34.57
Zm00001d016501_P001	Maize	cytosol	23.57	32.69
Zm00001d021978_P001	Maize	cytosol	17.67	31.49
Zm00001d006726_P001	Maize	cytosol	17.52	31.39
Zm00001d043043_P001	Maize	cytosol	26.82	26.09
Zm00001d038471_P001	Maize	cytosol, plasma membrane, plastid	26.98	25.97
Zm00001d053544_P001	Maize	mitochondrion, plastid	27.91	25.53
Zm00001d012494_P001	Maize	cytosol	26.05	25.34
Zm00001d016225_P001	Maize	plastid	28.37	25.1
Zm00001d021951_P001	Maize	plastid	17.36	24.09
Zm00001d035040_P007	Maize	mitochondrion	31.63	23.39
Zm00001d006705_P001	Maize	plastid	16.74	23.28
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	24.5	22.77
Zm00001d049708_P007	Maize	cytosol	30.54	22.34
Zm00001d020332_P001	Maize	cytosol	24.03	22.21
Zm00001d042608_P002	Maize	cytosol	29.61	20.65
Zm00001d003967_P001	Maize	plastid	14.11	20.22

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:103641388	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A1D6KHR4	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	ProteinID:ONM02543.1	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF49	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000221C511	InterPro:Ubox_domain	EnsemblPlantsGene:Zm00001d031263	EnsemblPlants:Zm00001d031263_P001	EnsemblPlants:Zm00001d031263_T001	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

U-box domain-containing protein 15

Coordinates

chr1:+:184281834..184284331

Molecular Weight (calculated)

71016.3 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.224

Length

645 amino acids

Sequence
(BLAST)

001: MPPPPTLPPS SPDDPAEPSS MGREMDDEDL VEELLLTVNA ARAFAEFRRT QRKECANLLR WLQLVLPLLE ELRDAAPRLT DDAYRRLALL GRALAAARRL
101: LRTCHDGSKI YLALESETVL AQFRDVYEKM HSALDGMPYA ELAISDEVKE QVELMNAQLM RCKKRTDTQD MELSMDLMVI LQNKEEEEQE RNADRAILER
201: LARKLELQTL AELRAETMAV KKLINERNES TTQMVGLLNR FKEIAGVDEK DVLGGDVSMP KSLDKCPSLM IPNDFLCPIT LGIMTDPVIV ASGQTYERRS
301: IQKWLDGGER TCPKSRQPLA HLSLAPNYAL KNLILQWCER NMVELQKREP AETESERKGE AADAADSIPS LVEGMSSIHP DVQRKAVKKI RRLSKECPEN
401: RALIVDSGGI PALIGLLACP DKKAQENTVT SLLNLSIDDK NKALIARGGA IPLVIEILRN GSPEAQENSA ATLFSLSMLD ENKAAIGSLG GLAPLVELLR
501: SSGTARGKKD AATAIFNLVL SPQNKVRATQ AGVVAALIGV MDDSALGMVD EALSIFLVLS SHAACRAEIG TTAFVERLVR LIKDGTPKNK ECALSVLLEL
601: GSNNRPLLVH GLRFGLHEDL SRIAKNGTSR AQRKANLLIQ LARKL

Best Arabidopsis Sequence Match ( AT5G42340.1 )
(BLAST)

001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI

Arabidopsis Description

PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.