Factsheet for HORVU7Hr1G061800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G293900.1	Wheat	cytosol	95.96	95.96
TraesCS7D01G289800.1	Wheat	cytosol	95.81	95.81
TraesCS7B01G186600.1	Wheat	cytosol	95.65	95.65
Os08t0481200-01	Rice	cytosol	80.59	80.84
EES15482	Sorghum	cytosol	79.04	79.16
Zm00001d031263_P001	Maize	cytosol	77.95	77.83
HORVU7Hr1G121810.1	Barley	cytosol	68.48	68.8
GSMUA_Achr4P05030_001	Banana	cytosol	51.24	62.98
GSMUA_Achr4P04900_001	Banana	cytosol	50.78	61.93
VIT_03s0038g03660.t01	Wine grape	cytosol	57.14	57.41
KRH40395	Soybean	cytosol	53.42	54.17
KRH00831	Soybean	cytosol	52.64	53.39
PGSC0003DMT400025648	Potato	cytosol	52.02	51.62
Solyc04g082440.2.1	Tomato	cytosol	51.86	51.46
CDY68037	Canola	cytosol	51.55	50.69
CDX95193	Canola	cytosol	51.55	50.69
Solyc12g094610.1.1	Tomato	cytosol	42.24	50.65
Bra027977.1-P	Field mustard	cytosol	50.93	50.31
VIT_18s0001g14180.t01	Wine grape	cytosol	52.8	49.71
PGSC0003DMT400075612	Potato	cytosol	49.53	49.46
AT5G42340.1	Thale cress	cytosol	49.53	48.33
KRH33490	Soybean	cytosol	38.35	47.05
HORVU7Hr1G000780.1	Barley	cytosol	36.34	39.66
HORVU5Hr1G021270.1	Barley	cytosol	38.35	36.22
HORVU5Hr1G021280.1	Barley	cytosol	38.35	35.9
HORVU4Hr1G059610.2	Barley	cytosol	40.22	33.55
HORVU7Hr1G038870.1	Barley	plastid	13.82	31.01
HORVU2Hr1G067610.6	Barley	cytosol	21.74	29.54
HORVU6Hr1G073280.1	Barley	cytosol	34.63	27.77
HORVU3Hr1G081380.1	Barley	cytosol	17.08	24.89
HORVU3Hr1G081300.1	Barley	plastid	25.93	24.27
HORVU2Hr1G036080.15	Barley	plastid	17.08	24.02
HORVU1Hr1G069990.1	Barley	plastid	25.16	23.75
HORVU3Hr1G113910.3	Barley	cytosol	29.81	22.91
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	24.53	22.54
HORVU6Hr1G041430.8	Barley	mitochondrion	28.26	22.09

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A287WPB8	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G061800	EnsemblPlants:HORVU7Hr1G061800.2	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315
PANTHER:PTHR23315:SF49	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000B47F89F
InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287WPB8]

Coordinates

chrchr7H:+:290933864..290936462

Molecular Weight (calculated)

71052.4 Da

IEP (calculated)

7.344

GRAVY (calculated)

-0.234

Length

644 amino acids

Sequence
(BLAST)

001: MPQPVLPPSS AATADPEPSR AGAREMDDED LVEELLATVN SARAYSEFRR TQRKECHNLL RWLQLILPLL EELRDSAPHL TDDAYRRLTL LGRALAAARR
101: LLRSCNDGSK IFLALESEAV LGRFRTVYEK MNSALDGMPY AELGISDEVT EQVELMNAQL MRCKKRTDTQ DIELSMDLMV ILQNNKDEER NADRAILDRL
201: ASKLELQMLA DLRAETVAIK KLINERNGQH ADSTKQIVEL LHKFKAIAGI EEKNVLGSEV FVTKSLDKCP SLMIPDDFLC PITLEIMTDP VIVASGQTYE
301: RRSIQKWLDS GERTCPKTRQ PLVHLSLAPN YALKNLILQW CDKHKVELQR REPEPVAEQD GHPREDIPSL VEALSSIHPD VQRKAAKKIR MLSKESPENR
401: ALIVGNGGIP ALIGLLAYPD KKVQENTVTS LLXXXIDHSN KLLITKGGAI PLIIEILRNG SAEGQENSAA TLFSLSMLDE NKATIGTLGG ITPLVELLTN
501: GTVRGKKDAA TAIFNLILNQ QNKVRATQAG IVPSLMKVMD DRSLGMVDEA LSIFLLLSSH PTSVGEIGTT PFVEKLVQLI KEGTPKNKEC ALSVLLELGS
601: KKQTLLVHAL RFGLHEHLSQ IAKTGTSRAQ RKANSLIQIA KKCY

Best Arabidopsis Sequence Match ( AT5G42340.1 )
(BLAST)

001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI

Arabidopsis Description

PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.