Factsheet for HORVU3Hr1G081300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G377600.1	Wheat	plastid	97.53	97.67
TraesCS3D01G339600.1	Wheat	plastid	97.67	97.53
TraesCS3A01G345800.1	Wheat	plastid	96.66	97.36
Os01t0823900-01	Rice	plastid	86.05	87.06
Zm00001d043043_P001	Maize	cytosol	81.54	84.62
Zm00001d012494_P001	Maize	cytosol	80.81	83.86
KXG33626	Sorghum	plastid	83.43	81.77
HORVU1Hr1G069990.1	Barley	plastid	73.98	74.63
GSMUA_Achr8P25140_001	Banana	plastid	36.48	59.76
GSMUA_Achr7P22130_001	Banana	cytosol	49.85	54.19
GSMUA_Achr4P00200_001	Banana	plastid	53.92	52.7
Bra001998.1-P	Field mustard	cytosol	38.37	44.22
Solyc09g018230.1.1	Tomato	plastid	43.75	43.75
PGSC0003DMT400071349	Potato	plastid	43.9	43.64
VIT_08s0058g01100.t01	Wine grape	plastid	42.88	43.57
AT5G01830.1	Thale cress	plastid	42.59	43.47
CDX71307	Canola	cytosol	42.15	43.09
Bra019022.1-P	Field mustard	cytosol	42.15	43.03
CDY31406	Canola	cytosol	42.01	42.88
KRH76105	Soybean	cytosol, plastid	41.86	41.03
KRH65448	Soybean	plastid	27.91	39.34
HORVU7Hr1G038870.1	Barley	plastid	13.23	31.71
HORVU7Hr1G000780.1	Barley	cytosol	25.0	29.15
HORVU6Hr1G041430.8	Barley	mitochondrion	34.88	29.13
HORVU5Hr1G021270.1	Barley	cytosol	26.89	27.13
HORVU5Hr1G021280.1	Barley	cytosol	26.89	26.89
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	27.03	26.53
HORVU7Hr1G121810.1	Barley	cytosol	24.71	26.52
HORVU2Hr1G067610.6	Barley	cytosol	18.02	26.16
HORVU7Hr1G061800.2	Barley	cytosol	24.27	25.93
HORVU4Hr1G059610.2	Barley	cytosol	28.2	25.13
HORVU2Hr1G036080.15	Barley	plastid	16.57	24.89
HORVU3Hr1G081380.1	Barley	cytosol	14.68	22.85
HORVU6Hr1G073280.1	Barley	cytosol	25.44	21.79
HORVU3Hr1G113910.3	Barley	cytosol	23.84	19.57

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A287LX11	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G081300	EnsemblPlants:HORVU3Hr1G081300.1	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF147	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000B467E8B	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287LX11]

Coordinates

chrchr3H:-:594390155..594392901

Molecular Weight (calculated)

73319.3 Da

IEP (calculated)

5.993

GRAVY (calculated)

0.048

Length

688 amino acids

Sequence
(BLAST)

001: MAKPRPVVTA ACASAAPSTS YASAFLPPPA SPSDGDLLRS LHRLARDLSA AYAPAPFLRA AFASVSRRAR LLAAAFDDLL LCAAGEGDLL PRSASLCLRE
101: VLLVLQRFKA VVADCAARSR TLLLLQSDEM DAELRDLHHD LATLLDLLPV VELGLADDVM DLLALASRQC RRCASAAEPE PALKTTVLSL IEEIEREIVP
201: ERERLEEILE EVGINDPASC SDEIDSLERE IGDRASERWT AAMIALVGLL RYAKCVLFSA TPRPSDSKAD VDVEDDGESP APPPDLRCPI SLDLMRDPVV
301: AASGQTYDRE SIDRWFSSGK STCPKTGQVL ANLELVPNKS LKNLISKWCR ENGVAMEVCE ASKSEQAQAV AANKAALEVA RMTASYLVKK LSISFSPDAA
401: NRVVHEIRLL SKSGSDNRAF VGEAGAVPML VPLLYSEDAG LQLNAVTALL NLSILEANKK RIMHADGAVE AVTHIMSSGT TWRAKENAAA AVLSLAAVHT
501: YRRRLGRNPS VVEKLVHLVR TGPTSTKKDA LAALLSLAGE RENVGKLVEA GVVEAALATI SDDETAAAVL AALAKRGGAE AIVKIDGAVA RLVAEMRRGT
601: EWARESATAA LVLLCRRLGS RAVTQVMGVP GVEWAIWELM GTGTDRARRK AASLGRICRR WAAASAADGE RGAECPASSV VPPAMMAS

Best Arabidopsis Sequence Match ( AT5G01830.1 )
(BLAST)

001: MAVTLDSPSP ARKRRPLVVG SFESPKLSSD TKLTRSLFLA SHEISSMQPL PFILRRNSLS LIRKVKILAS VFDELLLPRS QLVVYSQSAH LCFEEMQIVM
101: QRIKSLIDDC SRVSKLWLLL QIDIVAFNFH ELVTDLSTVL DILPLHDFDL SDDAQDLISL LTKQCSDSVQ FVDARDVALR RKVTDTIAGI KHQISPDHST
201: LIKIFNDLGL SDSASLTDEI QRLEDEIQDQ IDDRSKSAAA SLIGLVRYSK CVLYGPSTPA PDFRRHQSLS DANIPADFRC PITLELMRDP VVVATGQTYD
301: RESIDLWIQS GHNTCPKTGQ VLKHTSLVPN RALKNLIVLW CRDQKIPFEL YGDGGGEPAP CKEAVEFTKM MVSFLIEKLS VADSNGVVFE LRALAKSDTV
401: ARACIAEAGA IPKLVRYLAT ECPSLQINAV TTILNLSILE QNKTRIMETD GALNGVIEVL RSGATWEAKA NAAATLFSLA GVSAYRRRLG RKARVVSGLV
501: DLAKQGPTSS KRDALVAILN LVAERENVGR FVEAGVMGAA GDAFQELPEE AVAVVEAVVR RGGLMAVSAA FSLIRLLGEV MREGADTTRE SAAATLVTMC
601: RKGGSELVAE MAAIPGIERV IWEMIGAGTA RGGRKAASLM RYLRRWAAGD THNTAAETQS IVVPTPSRIF SPVL

Arabidopsis Description

PUB16RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178UNI7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.