Factsheet for HORVU7Hr1G038870.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G036080.15	Barley	plastid	93.73	58.73
TraesCS2D01G197200.1	Wheat	plastid	93.73	58.61
TraesCS2B01G216300.1	Wheat	plastid	93.03	58.3
TraesCS2A01G190800.1	Wheat	cytosol	85.37	56.19
Os07t0584900-01	Rice	plastid	86.41	53.1
EER97453	Sorghum	plastid	85.02	52.14
Zm00001d021951_P001	Maize	plastid	84.32	52.04
Zm00001d006705_P001	Maize	plastid	81.53	50.43
GSMUA_Achr4P06990_001	Banana	plastid	66.2	47.15
GSMUA_Achr4P11070_001	Banana	cytosol	64.11	43.6
GSMUA_Achr3P29830_001	Banana	cytosol	63.07	43.51
GSMUA_Achr1P22790_001	Banana	mitochondrion	64.81	41.06
KRH51173	Soybean	cytosol	56.79	38.08
KRH01984	Soybean	cytosol	56.1	37.88
VIT_00s2269g00010.t01	Wine grape	plastid	59.23	37.61
Solyc04g014810.2.1	Tomato	plastid	58.54	37.25
PGSC0003DMT400060674	Potato	plastid	58.54	37.25
KRH36562	Soybean	plastid	59.23	37.12
KRH11541	Soybean	plastid	58.88	36.98
Bra012713.1-P	Field mustard	cytosol	57.49	36.26
CDX90518	Canola	plastid	57.49	36.26
Solyc11g012440.1.1	Tomato	cytosol, plastid	57.84	36.17
PGSC0003DMT400034564	Potato	nucleus, plastid	57.49	36.03
CDY09688	Canola	cytosol	56.45	35.68
Bra038470.1-P	Field mustard	plastid	56.79	34.83
AT4G16490.1	Thale cress	plastid	56.79	34.53
HORVU3Hr1G081380.1	Barley	cytosol	40.77	26.47
HORVU7Hr1G000780.1	Barley	cytosol	34.84	16.95
HORVU2Hr1G067610.6	Barley	cytosol	25.44	15.4
HORVU5Hr1G021270.1	Barley	cytosol	35.19	14.81
HORVU5Hr1G021280.1	Barley	cytosol	35.19	14.68
HORVU3Hr1G113910.3	Barley	cytosol	40.77	13.96
HORVU7Hr1G061800.2	Barley	cytosol	31.01	13.82
HORVU4Hr1G059610.2	Barley	cytosol	36.24	13.47
HORVU6Hr1G073280.1	Barley	cytosol	37.63	13.45
HORVU3Hr1G081300.1	Barley	plastid	31.71	13.23
HORVU1Hr1G069990.1	Barley	plastid	31.01	13.05
HORVU7Hr1G121810.1	Barley	cytosol	28.92	12.95
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	30.31	12.41
HORVU6Hr1G041430.8	Barley	mitochondrion	31.36	10.92

Protein Annotations

EnsemblPlants:HORVU7Hr1G038870.1	EnsemblPlantsGene:HORVU7Hr1G038870	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989	PANTHER:PTHR23315
PANTHER:PTHR23315:SF129	PFscan:PS50176	SEG:seg	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000B461DDD
UniProt:A0A287W4D3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:100432756..100434226

Molecular Weight (calculated)

30224.0 Da

IEP (calculated)

9.176

GRAVY (calculated)

0.224

Length

287 amino acids

Sequence
(BLAST)

001: MVSLAGSQIL SPKQRSCAPR RPGRSMRTIR SALLHPDSPW PFVLACVQAL GPDAAPDTRR AAAARIRLLA KHRSDFRELV DVSGAIPVLV PLLRSIDPVA
101: QENAMMALLN LSLEEPNRSA ITAAGAIKPL VYALRTGTAS AKQNAACALL SLLGIEENRA TIGACGAIMP LVALLSVVST RGKKDALTTL YRLCSARRNK
201: ERDVSAGAVV PLVHLIGERD TGTSEKAMVV LASLASIADG RDAVVEAGGI PALVETIEDG PAREKEFAVV ALLQLCSECS SNRALLV

Best Arabidopsis Sequence Match ( AT2G23140.1 )
(BLAST)

001: MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.