Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G216300.1 | Wheat | plastid | 98.91 | 99.13 |
| TraesCS2A01G190800.1 | Wheat | cytosol | 93.68 | 98.62 |
| HORVU2Hr1G036080.15 | Barley | plastid | 98.04 | 98.25 |
| HORVU7Hr1G038870.1 | Barley | plastid | 58.61 | 93.73 |
| Zm00001d021951_P001 | Maize | plastid | 89.11 | 87.96 |
| EER97453 | Sorghum | plastid | 89.32 | 87.61 |
| Os07t0584900-01 | Rice | plastid | 89.11 | 87.58 |
| Zm00001d006705_P001 | Maize | plastid | 84.1 | 83.19 |
| GSMUA_Achr4P06990_001 | Banana | plastid | 62.31 | 70.97 |
| GSMUA_Achr4P11070_001 | Banana | cytosol | 61.0 | 66.35 |
| GSMUA_Achr3P29830_001 | Banana | cytosol | 58.39 | 64.42 |
| GSMUA_Achr1P22790_001 | Banana | mitochondrion | 61.0 | 61.81 |
| VIT_00s2269g00010.t01 | Wine grape | plastid | 54.9 | 55.75 |
| Solyc04g014810.2.1 | Tomato | plastid | 54.25 | 55.21 |
| PGSC0003DMT400060674 | Potato | plastid | 54.03 | 54.99 |
| KRH51173 | Soybean | cytosol | 50.76 | 54.44 |
| KRH01984 | Soybean | cytosol | 50.11 | 54.12 |
| Solyc11g012440.1.1 | Tomato | cytosol, plastid | 53.81 | 53.81 |
| PGSC0003DMT400034564 | Potato | nucleus, plastid | 53.16 | 53.28 |
| KRH36562 | Soybean | plastid | 52.72 | 52.84 |
| KRH11541 | Soybean | plastid | 52.07 | 52.3 |
| Bra012713.1-P | Field mustard | cytosol | 51.2 | 51.65 |
| CDX90518 | Canola | plastid | 51.2 | 51.65 |
| CDY09688 | Canola | cytosol | 50.76 | 51.32 |
| Bra038470.1-P | Field mustard | plastid | 51.42 | 50.43 |
| AT4G16490.1 | Thale cress | plastid | 50.76 | 49.36 |
| TraesCS2D01G194400.1 | Wheat | cytosol | 34.86 | 44.32 |
| TraesCS3D01G382500.1 | Wheat | cytosol | 33.55 | 34.84 |
| TraesCS6D01G274500.1 | Wheat | cytosol | 29.63 | 21.22 |
| TraesCS7D01G001600.2 | Wheat | cytosol, plastid | 27.67 | 21.1 |
| TraesCS3D01G527900.1 | Wheat | cytosol | 37.25 | 20.58 |
| TraesCS2D01G275400.1 | Wheat | nucleus | 19.39 | 19.35 |
| TraesCS5D01G093700.1 | Wheat | cytosol | 26.8 | 17.98 |
| TraesCS7D01G289800.1 | Wheat | cytosol | 24.84 | 17.7 |
| TraesCS1D01G299400.1 | Wheat | cytosol, plastid | 24.84 | 17.09 |
| TraesCS4D01G207700.2 | Wheat | plastid | 28.76 | 16.99 |
| TraesCS3D01G339600.1 | Wheat | plastid | 24.4 | 16.26 |
| TraesCS7D01G536300.1 | Wheat | cytosol | 22.0 | 15.66 |
| TraesCS5D01G204700.1 | Wheat | cytosol, plasma membrane | 23.53 | 15.41 |
| TraesCS2D01G475600.1 | Wheat | cytosol, plasma membrane | 22.66 | 15.09 |
| TraesCS6D01G180400.1 | Wheat | plastid | 23.75 | 15.03 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G197200.1 | EnsemblPlantsGene:TraesCS2D01G197200 | Gene3D:1.25.10.10 | Gene3D:1.25.10.110 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | InterPro:IPR000225 | InterPro:IPR011989 |
| PANTHER:PTHR23315 | PANTHER:PTHR23315:SF129 | PFAM:PF00514 | PFscan:PS50176 | SEG:seg | SMART:SM00185 |
| SUPFAM:SSF48371 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:143892759..143894947
Molecular Weight (calculated)
47312.4 Da
IEP (calculated)
7.069
GRAVY (calculated)
-0.009
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLAGSQIL SPKQRPCAPR RPGHSMRTIR SALLHPDSPP GPSSRPRAAA DEGDSDIENL TDSVIDFRLS ELAATAGPAH PAAVAKSSSA NAAATEMLEL
101: SRDFSDYSSF NSDISGELER LAAAAATPRS DAPDLAAVDL NDLESMDLSA DAAPLDRVEP FVLACVQALG PDAAPDARRA AAARIRLLAK HRSDIRELVG
201: VSGAIPALVP LLRSTDPVAQ ENAVTALLNL SLEERNRSAI TAAGAIKPLV YALRTGTASA KQNAACALLS LSGIEENRAT IGACGAIAPL VALLSAGSTR
301: GKKDALTTLY RLCSARRNKE RAVSAGAVVP LVHLIGERGT GTSEKAMVVL ASLASIAEGR DAVVEAGGIP ALVETIEDGP AREKEFAVVA LLQLCSECSS
401: NRALLVREGA IPPLVALSQS GSARAKHKAE TLLGYLREQR QGGGGCRAGQ GGAATSMAR
101: SRDFSDYSSF NSDISGELER LAAAAATPRS DAPDLAAVDL NDLESMDLSA DAAPLDRVEP FVLACVQALG PDAAPDARRA AAARIRLLAK HRSDIRELVG
201: VSGAIPALVP LLRSTDPVAQ ENAVTALLNL SLEERNRSAI TAAGAIKPLV YALRTGTASA KQNAACALLS LSGIEENRAT IGACGAIAPL VALLSAGSTR
301: GKKDALTTLY RLCSARRNKE RAVSAGAVVP LVHLIGERGT GTSEKAMVVL ASLASIAEGR DAVVEAGGIP ALVETIEDGP AREKEFAVVA LLQLCSECSS
401: NRALLVREGA IPPLVALSQS GSARAKHKAE TLLGYLREQR QGGGGCRAGQ GGAATSMAR
001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.