CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36562	Soybean	plastid	96.28	96.07
VIT_00s2269g00010.t01	Wine grape	plastid	78.34	79.2
KRH01984	Soybean	cytosol	73.3	78.82
KRH51173	Soybean	cytosol	73.74	78.74
AT4G16490.1	Thale cress	plastid	76.37	73.94
Bra038470.1-P	Field mustard	plastid	75.27	73.5
PGSC0003DMT400034564	Potato	nucleus, plastid	73.3	73.14
Bra012713.1-P	Field mustard	cytosol	72.43	72.75
CDY09688	Canola	cytosol	72.21	72.69
Solyc11g012440.1.1	Tomato	cytosol, plastid	72.87	72.55
PGSC0003DMT400060674	Potato	plastid	71.55	72.51
Solyc04g014810.2.1	Tomato	plastid	71.33	72.28
CDX90518	Canola	plastid	71.77	72.09
GSMUA_Achr4P06990_001	Banana	plastid	52.52	59.55
HORVU7Hr1G038870.1	Barley	plastid	36.98	58.88
GSMUA_Achr4P11070_001	Banana	cytosol	53.83	58.29
GSMUA_Achr3P29830_001	Banana	cytosol	51.64	56.73
GSMUA_Achr1P22790_001	Banana	mitochondrion	53.39	53.86
Zm00001d021951_P001	Maize	plastid	54.49	53.55
EER97453	Sorghum	plastid	54.7	53.42
Os07t0584900-01	Rice	plastid	54.05	52.89
Zm00001d006705_P001	Maize	plastid	53.61	52.8
HORVU2Hr1G036080.15	Barley	plastid	52.74	52.62
TraesCS2D01G197200.1	Wheat	plastid	52.3	52.07
TraesCS2A01G190800.1	Wheat	cytosol	49.67	52.06
TraesCS2B01G216300.1	Wheat	plastid	52.08	51.97
KRH15451	Soybean	cytosol	30.63	51.66
KRH17146	Soybean	cytosol	25.82	49.58
KRH05594	Soybean	cytosol	36.98	48.01
KRH52088	Soybean	cytosol	33.7	47.09
KRH04403	Soybean	mitochondrion	26.7	33.7
KRH68828	Soybean	cytosol	21.01	22.33
KRG97080	Soybean	cytosol, nucleus	21.23	22.05
KRG92593	Soybean	cytosol	21.23	21.9
KRG91959	Soybean	cytosol	29.54	21.39
KRH34817	Soybean	cytosol	29.54	21.36
KRH24807	Soybean	cytosol	30.85	21.3
KRH29807	Soybean	cytosol	30.63	21.18
KRH72794	Soybean	plasma membrane	36.32	20.42
KRH30135	Soybean	cytosol	37.42	20.41
KRG89279	Soybean	cytosol	28.88	20.28
KRG99581	Soybean	cytosol	20.35	20.17
KRH50347	Soybean	nucleus	28.67	20.03
KRH33490	Soybean	cytosol	22.98	20.0
KRH46608	Soybean	cytosol	20.13	19.96
KRG98177	Soybean	cytosol	36.32	19.74
KRH00831	Soybean	cytosol	26.7	19.21
KRH40395	Soybean	cytosol	26.48	19.06
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.04	18.55
KRG99865	Soybean	cytosol	24.29	17.99
KRH67390	Soybean	cytosol, plastid	32.6	17.41
KRH42917	Soybean	mitochondrion	25.6	16.36
KRH11061	Soybean	mitochondrion, plastid	25.6	16.34
KRH21208	Soybean	mitochondrion	25.38	16.2
KRH73275	Soybean	cytosol	17.94	16.11
KRH59027	Soybean	mitochondrion	25.16	16.08
KRH76105	Soybean	cytosol, plastid	21.01	13.68
KRH69547	Soybean	cytosol, plastid	21.01	13.46
KRH03317	Soybean	cytosol, plastid	19.91	13.46
KRH54418	Soybean	cytosol, plastid	19.69	13.18
KRH32190	Soybean	cytosol	17.72	12.22
KRH65448	Soybean	plastid	10.94	10.25

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100818658	MapMan:35.1	EMBL:ACUP02009215	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	EnsemblPlantsGene:GLYMA_15G115800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	UniProt:I1MFP6	InterPro:IPR000225
InterPro:IPR011989	EnsemblPlants:KRH11541	ProteinID:KRH11541	ProteinID:KRH11541.1	PFAM:PF00514	PFscan:PS50176
PANTHER:PTHR23315	PANTHER:PTHR23315:SF129	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000233B5C6	SEG:seg

Description

hypothetical protein

Coordinates

chr15:+:9118834..9121579

Molecular Weight (calculated)

49203.6 Da

IEP (calculated)

6.531

GRAVY (calculated)

-0.191

Length

457 amino acids

Sequence
(BLAST)

001: MVSLEESRSN SSRFPLARSY QYHSSVSSKT QRQIGRSMRT IRSNFFQDDN SSSCSFTEKS TCLSENLTDS VVDLRLGELA LRNSKSVKYS PTEEELLDLS
101: QAFSDFSACS SDISGELQRL ATLPSPKKSD FSGENEAPEP EIEPCMGFLQ RENFSTEIIE SISPEDLQPT VKMCIDGLQS QSVAVKRSAA AKLRLLAKNR
201: ADNRVLIAES GAVPVLAPLL RCSDPWTQEH AVTALLNLSL HEDNKMLITN AGAVKSLVYV LKTGTETSKQ NAACALLSLA LVEENKSSIG ASGAIPPLVS
301: LLLNGSSRGK KDALTTLYKL CSVRQNKERT VSAGAVKPLV ELVAEQGSGM AEKAMVVLNS LAGIQEGKNA IVEEGGIAAL VEAIEDGSVK GKEFAVLTLL
401: QLCVDSVRNR GFLVREGGIP PLVALSQTGS VRAKHKAETL LRYLRESRQE AASTSSS

Best Arabidopsis Sequence Match ( AT4G16490.1 )
(BLAST)

001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.