CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54418	Soybean	cytosol, plastid	59.32	58.71
PGSC0003DMT400062931	Potato	cytosol	57.84	57.33
VIT_17s0000g08080.t01	Wine grape	cytosol, mitochondrion	57.54	57.29
Solyc03g114160.1.1	Tomato	cytosol	57.1	56.6
KRH69547	Soybean	cytosol, plastid	46.3	43.9
GSMUA_Achr9P14560_001	Banana	cytosol	36.24	41.88
GSMUA_Achr3P06160_001	Banana	plastid	32.4	38.62
TraesCS2A01G475600.1	Wheat	cytosol, plasma membrane	39.35	38.49
TraesCS2B01G499300.1	Wheat	plasma membrane	38.91	38.17
TraesCS2D01G475600.1	Wheat	cytosol, plasma membrane	38.61	37.88
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	38.76	37.75
Os09t0378700-00	Rice	plasma membrane, plastid	39.35	37.36
OQU80426	Sorghum	endoplasmic reticulum, plasma membrane	39.05	36.97
Zm00001d020332_P001	Maize	cytosol	37.72	36.53
KXG35540	Sorghum	plasma membrane	38.31	36.17
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	37.13	35.81
TraesCS5A01G198800.1	Wheat	cytosol, plasma membrane	37.13	35.81
TraesCS5D01G204700.1	Wheat	cytosol, plasma membrane	36.69	35.38
TraesCS5B01G197400.1	Wheat	cytosol, plasma membrane, plastid	36.69	35.38
Os08t0415600-00	Rice	cytosol	35.8	33.75
KRH17146	Soybean	cytosol	11.83	33.61
KRH04403	Soybean	mitochondrion	17.31	32.32
KRH11061	Soybean	mitochondrion, plastid	33.43	31.56
KRH21208	Soybean	mitochondrion	33.28	31.42
KRH73275	Soybean	cytosol	23.37	31.04
KRH68828	Soybean	cytosol	19.53	30.7
KRH59027	Soybean	mitochondrion	32.4	30.63
KRH42917	Soybean	mitochondrion	32.1	30.35
KRG91959	Soybean	cytosol	28.25	30.27
KRH34817	Soybean	cytosol	28.11	30.06
KRG97080	Soybean	cytosol, nucleus	19.53	30.0
KRH65448	Soybean	plastid	21.15	29.3
KRH29807	Soybean	cytosol	28.55	29.2
KRH24807	Soybean	cytosol	28.25	28.85
KRH15451	Soybean	cytosol	10.95	27.31
KRH46608	Soybean	cytosol	18.49	27.11
KRH40395	Soybean	cytosol	25.3	26.93
KRH76105	Soybean	cytosol, plastid	27.96	26.92
KRG99865	Soybean	cytosol	24.41	26.74
KRG89279	Soybean	cytosol	25.74	26.73
KRH00831	Soybean	cytosol	25.0	26.61
KRH50347	Soybean	nucleus	25.74	26.61
KRG99581	Soybean	cytosol	18.05	26.46
KRG92593	Soybean	cytosol	17.01	25.96
KRH05594	Soybean	cytosol	11.98	23.01
KRH33490	Soybean	cytosol	17.46	22.48
KRH52088	Soybean	cytosol	10.5	21.71
KRH01984	Soybean	cytosol	13.17	20.94
KRH51173	Soybean	cytosol	13.17	20.79
KRH11541	Soybean	plastid	13.46	19.91
KRH36562	Soybean	plastid	13.46	19.87
KRH72794	Soybean	plasma membrane	23.82	19.8
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.82	19.78
KRH30135	Soybean	cytosol	23.37	18.85
KRG98177	Soybean	cytosol	23.37	18.79
KRH67390	Soybean	cytosol, plastid	23.37	18.46
KRH32190	Soybean	cytosol	17.46	17.8

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100787869	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	EMBL:ACUP02010343	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	EnsemblPlantsGene:GLYMA_17G090900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	UniProt:I1MTI6	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	EnsemblPlants:KRH03317	ProteinID:KRH03317	ProteinID:KRH03317.1	EMBL:KT031227	PFAM:PF04564
PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF161	SMART:SM00185	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000233E811	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:7079461..7081491

Molecular Weight (calculated)

74292.5 Da

IEP (calculated)

8.670

GRAVY (calculated)

0.034

Length

676 amino acids

Sequence
(BLAST)

001: MTQRDRRTLS FPAVHPCEAI SPPTLVTSLI TLSQSICNFQ PQSFPTQRRN ARETIRQISI VLMFLQEIRL IPNSTILSLA ELHFTLQKIH FLLQDCTLQG
101: SRLLLLAKSQ HVASLFPALL RSVATSLDVL PLHQLHLCPE VRELADLVTK QASKAKFQLD PSDARATKTL HTLLRQFSMG TEPDLTSMQG ILHYLQIRTW
201: TDCNTEIKFL EEEITLECRD REEKEVPLLS SLVGFLCYCR GVIFETNQSQ GRCSTEMTSL NLTLLTSVNP DDFRCPISLE LMTDPVTVST GQTYDRASIQ
301: KWLKAGNTKC PKTGEKLTNT DLVPNTTLKR LIQQFCADNG ISVANSCNRK TNTVSAGSPA AAHAIQFLAW FLTRRLAFGT QDQKHKAAQE IRFLARTSIF
401: NRACLIEMGT VPPLIELLAS ASNDNKSTQE TTISALLKLS KHPNGPKNII NSGGLTVILS VLKNGLSLEA RQVAAATIFY LSSVKEFRKL IGENPDVIPA
501: LVELVKEGTT CGRKNAVVAI FGLLLLPRNH QRVIAAGAVP ALLDIIASSN KDELVTESLA VLAALAENVD GAREILQGSA LRLIVGMLRS ATSREGKEHS
601: ASILLSLCVN VGAEVVAVLA KEPSLMPLLY SLLTDGTCHA AKKARFLIKV IQDFHETRSA GLKGSSLPQE RSLHVW

Best Arabidopsis Sequence Match ( AT1G60190.1 )
(BLAST)

001: MIHTPTGSSR RILTFPAVNP CESISLTTLV DSLLQLAGEI LSFKPKHFST NKRSVKETLR HVQTLVIFFE ELRIQIRVGS IPAGRSVILS LSELHVIFQK
101: LKFLLDDCTR DGAKLYMLMN SGQVSAHFRD LTRSISTSLD TFPVRSVDLP GEVNELIYLV MRQTRKSEAR PDRDDKRAID SVYWFFNLFE NRINPNSDEI
201: LRVLDHIGVR KWRDCVKEID FLREEISVGK KSNIEIELLS NLMGFICYCR CVILRGIDVD DEEKDKEEDD LMMVRSLNVD DLRCPISLEI MSDPVVLESG
301: HTYDRSSITK WFASGNITCP KTGKTLVSTV LVDNFSVKQV IQSYSKQNGV VMGQKGKKKV DVAESLAAEE AGKLTAEFLA GELIKGDEEE MVKALVEIRI
401: LTKTSTFYRS CLVEAGVVES LMKILRSDDP RIQENAMAGI MNLSKDIAGK TRIVGEDGGG LRLIVEVLND GARRESRQYA AAALFYLSSL GDYSRLIGEI
501: SDAIPGLVRI VKSCDYGDSA KRNALIAIRS LLMNQPDNHW RILAAGIVPV LLDLVKSEEI SDGVTADSMA ILAKMAEYPD GMISVLRRGG LKLAVKILGS
601: SEVSPATKQH CVALLLNLCH NGGSDVVGSL AKNPSIMGSL YTASSNGELG GGKKASALIK MIHEFQERKT GPGEPVLERE RFVHAW

Arabidopsis Description

PUB19U-box domain-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:O80742]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.