CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.08	56.27
KRH67390	Soybean	cytosol, plastid	68.33	52.92
VIT_07s0005g03520.t01	Wine grape	cytosol	55.05	46.38
PGSC0003DMT400026700	Potato	cytosol	47.06	40.1
Solyc09g025270.2.1	Tomato	cytosol	44.49	39.39
AT3G54790.1	Thale cress	cytosol	43.44	37.89
Bra014787.1-P	Field mustard	cytosol	41.93	37.67
CDY64696	Canola	cytosol, extracellular, mitochondrion, plastid	41.78	37.53
CDY02891	Canola	cytosol	41.63	37.45
GSMUA_Achr6P36530_001	Banana	cytosol	37.1	37.27
CDX78262	Canola	cytosol	39.22	37.04
Bra007097.1-P	Field mustard	cytosol	39.06	36.89
CDX73449	Canola	cytosol	39.06	36.79
GSMUA_Achr5P21360_001	Banana	cytosol	40.42	35.31
KRH30135	Soybean	cytosol	34.24	27.09
KRH72794	Soybean	plasma membrane	32.73	26.69
KRG98177	Soybean	cytosol	33.63	26.52
KRH04403	Soybean	mitochondrion	14.03	25.69
KRH68828	Soybean	cytosol	16.29	25.12
KRG97080	Soybean	cytosol, nucleus	16.44	24.77
KRG91959	Soybean	cytosol	23.53	24.72
KRH17146	Soybean	cytosol	8.75	24.37
KRH34817	Soybean	cytosol	23.08	24.21
KRH40395	Soybean	cytosol	22.93	23.94
KRH00831	Soybean	cytosol	22.78	23.78
KRH46608	Soybean	cytosol	15.84	22.78
KRH24807	Soybean	cytosol	22.62	22.66
KRG99581	Soybean	cytosol	15.69	22.56
KRH29807	Soybean	cytosol	22.32	22.39
KRH65448	Soybean	plastid	16.14	21.93
KRG92593	Soybean	cytosol	14.63	21.9
KRH73275	Soybean	cytosol	16.74	21.81
KRG99865	Soybean	cytosol	19.61	21.07
KRH05594	Soybean	cytosol	11.16	21.02
KRG89279	Soybean	cytosol	19.91	20.28
KRH33490	Soybean	cytosol	15.99	20.19
KRH50347	Soybean	nucleus	19.91	20.18
KRH52088	Soybean	cytosol	9.95	20.18
KRH51173	Soybean	cytosol	12.82	19.86
KRH15451	Soybean	cytosol	7.84	19.19
KRH01984	Soybean	cytosol	12.22	19.06
KRH59027	Soybean	mitochondrion	19.46	18.04
KRH36562	Soybean	plastid	12.37	17.9
KRH42917	Soybean	mitochondrion	19.31	17.9
KRH11541	Soybean	plastid	12.22	17.72
KRH11061	Soybean	mitochondrion, plastid	19.0	17.6
KRH21208	Soybean	mitochondrion	19.0	17.6
KRH03317	Soybean	cytosol, plastid	17.8	17.46
KRH76105	Soybean	cytosol, plastid	18.4	17.38
KRH54418	Soybean	cytosol, plastid	17.35	16.84
KRH69547	Soybean	cytosol, plastid	17.5	16.27

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02006104	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G037500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	UniProt:I1L8E5	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	EnsemblPlants:KRH32190	ProteinID:KRH32190	ProteinID:KRH32190.1	PFAM:PF00514	PFAM:PF04564
PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF119	SMART:SM00185	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI00023C9260	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:3301036..3306042

Molecular Weight (calculated)

74373.3 Da

IEP (calculated)

5.833

GRAVY (calculated)

-0.236

Length

663 amino acids

Sequence
(BLAST)

001: MHLGQTDTTS VKCLINSISR FIHLVSCQTM KPMPFQNICN NMVGVLKRLK PVLDDIMDYQ IPSNVNLCKE CEELDMQVNE ARDFIEKWSP KMSKIHSVLQ
101: GGTLLIKLQS TSLDICHMIV KSLQSPPSAS VLANLQHYIQ ELQCFKKEMA MVFIEEALRN QRDNVELCTE HLKEIIELLK LTSNQELLRE SIAVEKERLN
201: AEVNKMKGDL EELDDIVILV CNLRDYVMKT ECPVVKSGLL IPLYFRCPLS LELMLDPVIV ASGQTYERQS IQKWLDHGLT VCPKTRQRLT PTNLIPNYTV
301: KAMIATWCEE NNVKLSGNSE QNNSACITSP SDHLLPQDLT HDCCVESLPS SNSISRSALQ TENAFEKQKG DNSFRLCEEY NGCQSGAIEK CEQQSPYTHS
401: RSESFSSSIS STDCAHAVSK EVSGISNKLQ NVKVLSGEIT KVCPPSPGNK QSGISPWLSG TQFQSPGSNV GVLENGNNNN SHSRFDSHPV FNSGSDELTT
501: SSHVIRLIED LHSQSIETQT AAAEELRLLT KHNKENRIIV GQYGAVAPLL SLLYSDLQVT QEHAVTALLN LSINEDNKAL IMEAGAIEPL IHVLSTGNDS
601: AKENSAATIF SLSIIENNKA RNWPFWSSLK LWWIFLPQEL LEERRMLLLL YLTCQYFMRI KLV

Best Arabidopsis Sequence Match ( AT2G23140.1 )
(BLAST)

001: MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.