Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97080 | Soybean | cytosol, nucleus | 94.42 | 92.27 |
| VIT_04s0043g00840.t01 | Wine grape | cytosol | 65.81 | 62.2 |
| KRG92593 | Soybean | cytosol | 62.56 | 60.72 |
| KRG99581 | Soybean | cytosol | 60.47 | 56.4 |
| KRH46608 | Soybean | cytosol | 60.23 | 56.18 |
| GSMUA_Achr6P06560_001 | Banana | cytosol | 48.37 | 55.76 |
| GSMUA_Achr10P... | Banana | cytosol | 46.28 | 53.21 |
| Bra040374.1-P | Field mustard | cytosol | 54.88 | 52.33 |
| CDY08002 | Canola | cytosol | 55.12 | 52.09 |
| Bra001247.1-P | Field mustard | cytosol | 55.12 | 51.97 |
| CDX74050 | Canola | cytosol | 54.88 | 51.75 |
| AT3G07360.1 | Thale cress | cytosol | 55.35 | 51.74 |
| CDY28059 | Canola | cytosol | 55.58 | 51.73 |
| CDY71737 | Canola | cytosol | 55.58 | 51.73 |
| Bra029642.1-P | Field mustard | cytosol | 54.88 | 51.08 |
| GSMUA_Achr9P01670_001 | Banana | cytosol | 54.65 | 50.43 |
| Solyc04g050780.1.1 | Tomato | cytosol | 48.84 | 48.72 |
| Os02t0488600-01 | Rice | cytosol, nucleus | 47.21 | 47.99 |
| PGSC0003DMT400039084 | Potato | cytosol | 49.3 | 47.86 |
| Solyc04g050770.1.1 | Tomato | cytosol | 48.84 | 47.4 |
| PGSC0003DMT400011486 | Potato | cytosol | 39.07 | 47.06 |
| Zm00001d016501_P001 | Maize | cytosol | 48.14 | 44.52 |
| EES06804 | Sorghum | cytosol | 47.91 | 44.4 |
| Os04t0348400-01 | Rice | cytosol | 45.81 | 42.92 |
| TraesCS2A01G276400.1 | Wheat | nucleus | 44.42 | 41.52 |
| TraesCS2B01G294100.1 | Wheat | nucleus | 44.19 | 41.3 |
| TraesCS2D01G275400.1 | Wheat | nucleus | 44.19 | 41.3 |
| HORVU2Hr1G067610.6 | Barley | cytosol | 45.12 | 40.93 |
| CDY68352 | Canola | cytosol | 40.47 | 38.16 |
| KRH04403 | Soybean | mitochondrion | 31.86 | 37.85 |
| AT5G18320.1 | Thale cress | cytosol | 40.23 | 37.77 |
| CDY38506 | Canola | cytosol | 39.53 | 37.28 |
| KRH17146 | Soybean | cytosol | 20.23 | 36.55 |
| KRH15451 | Soybean | cytosol | 21.86 | 34.69 |
| AT5G18330.1 | Thale cress | cytosol | 33.26 | 32.13 |
| AT5G18340.1 | Thale cress | nucleus | 33.26 | 31.36 |
| KRH05594 | Soybean | cytosol | 25.12 | 30.68 |
| CDX70810 | Canola | cytosol | 32.33 | 29.45 |
| Bra006451.1-P | Field mustard | cytosol | 30.7 | 28.27 |
| KRH52088 | Soybean | cytosol | 21.16 | 27.83 |
| KRG91959 | Soybean | cytosol | 40.23 | 27.42 |
| KRH34817 | Soybean | cytosol | 39.77 | 27.06 |
| KRH29807 | Soybean | cytosol | 40.0 | 26.02 |
| KRH24807 | Soybean | cytosol | 40.0 | 25.98 |
| CDY51235 | Canola | extracellular, golgi | 30.7 | 25.43 |
| KRH50347 | Soybean | nucleus | 37.91 | 24.92 |
| KRG89279 | Soybean | cytosol | 37.67 | 24.88 |
| KRH51173 | Soybean | cytosol | 21.4 | 21.5 |
| KRH01984 | Soybean | cytosol | 21.16 | 21.41 |
| KRG99865 | Soybean | cytosol | 30.23 | 21.07 |
| KRH11541 | Soybean | plastid | 22.33 | 21.01 |
| KRH36562 | Soybean | plastid | 22.33 | 20.96 |
| KRH00831 | Soybean | cytosol | 30.93 | 20.94 |
| KRH11061 | Soybean | mitochondrion, plastid | 34.65 | 20.81 |
| KRH40395 | Soybean | cytosol | 30.7 | 20.79 |
| KRH59027 | Soybean | mitochondrion | 33.95 | 20.42 |
| KRH21208 | Soybean | mitochondrion | 33.72 | 20.25 |
| KRH03317 | Soybean | cytosol, plastid | 30.7 | 19.53 |
| KRH42917 | Soybean | mitochondrion | 32.09 | 19.3 |
| KRG95672 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.51 | 19.29 |
| KRH72794 | Soybean | plasma membrane | 35.81 | 18.94 |
| KRH73275 | Soybean | cytosol | 22.09 | 18.66 |
| KRH30135 | Soybean | cytosol | 36.28 | 18.62 |
| KRH67390 | Soybean | cytosol, plastid | 36.98 | 18.57 |
| KRG98177 | Soybean | cytosol | 35.58 | 18.19 |
| KRH54418 | Soybean | cytosol, plastid | 28.6 | 18.01 |
| KRH76105 | Soybean | cytosol, plastid | 29.3 | 17.95 |
| KRH69547 | Soybean | cytosol, plastid | 29.53 | 17.81 |
| KRH33490 | Soybean | cytosol | 21.4 | 17.52 |
| KRH32190 | Soybean | cytosol | 25.12 | 16.29 |
| KRH65448 | Soybean | plastid | 18.37 | 16.19 |
| Bra002153.1-P | Field mustard | cytosol | 40.0 | 12.59 |
| CDX70805 | Canola | cytosol | 32.56 | 9.09 |
| CDY51234 | Canola | cytosol | 34.65 | 8.99 |
| Bra006452.1-P | Field mustard | cytosol | 34.65 | 8.97 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100806619 | MapMan:19.2.2.1.5.2.1 | Gene3D:3.30.40.10 | EMBL:ACUP02002125 | InterPro:ARM-like |
| InterPro:ARM-type_fold | EnsemblPlantsGene:GLYMA_03G253100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| UniProt:I1JRU8 | InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | ProteinID:KRH68827.1 | EnsemblPlants:KRH68828 |
| ProteinID:KRH68828 | ProteinID:KRH68828.1 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF75 |
| SMART:SM00504 | SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniParc:UPI00023378B4 | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:44880139..44882091
Molecular Weight (calculated)
47525.4 Da
IEP (calculated)
6.647
GRAVY (calculated)
-0.190
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MASELKEKLR ELVKAIVDSD DYSLQAADEA IATLSSLKHL KSPDDFPLPP QFRCPISTQL MSDPVILSTG QTYDRPFIQR WLNEGHRTCP QTQQVLSHTI
101: LTPNYLVRDM ILQWCRDRGI DLPGPVKDID EAVTNADRNH LNSLLRKLQL SVPDQKEAAK ELRLLTKRMP SIRTLVGESS DVIPQLLSPL SSPGAASTDP
201: DLHEDLITTI LNLSIHDDNK KVFATDPAVI SLLIDALKCG TIQTRSNAAA TIFTLSAIDS NKHIIGESGA IKHLLELLDE GQPFAMKDAA SAIFNLCLVH
301: ENKGRTVRDG AVRVILNKMM DHILVDELLA ILALLSSHPK AVEEMGDFDA VPLLLGIIRE STSERSKENC VAILYTICFS DRTKLKEIRE EEKANGTLSK
401: LAKCGTSRAK RKANGILERL NRSPSLTHTA
101: LTPNYLVRDM ILQWCRDRGI DLPGPVKDID EAVTNADRNH LNSLLRKLQL SVPDQKEAAK ELRLLTKRMP SIRTLVGESS DVIPQLLSPL SSPGAASTDP
201: DLHEDLITTI LNLSIHDDNK KVFATDPAVI SLLIDALKCG TIQTRSNAAA TIFTLSAIDS NKHIIGESGA IKHLLELLDE GQPFAMKDAA SAIFNLCLVH
301: ENKGRTVRDG AVRVILNKMM DHILVDELLA ILALLSSHPK AVEEMGDFDA VPLLLGIIRE STSERSKENC VAILYTICFS DRTKLKEIRE EEKANGTLSK
401: LAKCGTSRAK RKANGILERL NRSPSLTHTA
001: MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IDDEDDLGVQ TIDQLQDALS ALREATMRKM AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA
Arabidopsis Description
PUB9RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.