Factsheet for Os04t0348400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G294100.1	Wheat	nucleus	75.82	75.65
TraesCS2A01G276400.1	Wheat	nucleus	75.82	75.65
TraesCS2D01G275400.1	Wheat	nucleus	75.38	75.22
HORVU2Hr1G067610.6	Barley	cytosol	74.95	72.57
Os02t0488600-01	Rice	cytosol, nucleus	61.0	66.19
GSMUA_Achr6P06560_001	Banana	cytosol	47.49	58.45
GSMUA_Achr10P...	Banana	cytosol	44.44	54.55
GSMUA_Achr9P01670_001	Banana	cytosol	54.25	53.43
KRH68828	Soybean	cytosol	42.92	45.81
VIT_04s0043g00840.t01	Wine grape	cytosol	44.01	44.4
KRG97080	Soybean	cytosol, nucleus	42.48	44.32
AT3G07360.1	Thale cress	cytosol	44.01	43.91
VIT_00s0524g00030.t01	Wine grape	cytosol	42.92	43.88
CDY71737	Canola	cytosol	44.01	43.72
CDX74050	Canola	cytosol	43.36	43.64
CDY28059	Canola	cytosol	43.79	43.51
Bra001247.1-P	Field mustard	cytosol	43.14	43.42
Bra029642.1-P	Field mustard	cytosol	43.57	43.29
PGSC0003DMT400016998	Potato	cytosol	42.05	42.98
CDY08002	Canola	cytosol	42.48	42.86
Bra040374.1-P	Field mustard	cytosol	41.83	42.57
Solyc09g056450.2.1	Tomato	cytosol	41.61	42.54
KRG99581	Soybean	cytosol	42.27	42.08
KRH46608	Soybean	cytosol	42.27	42.08
KRG92593	Soybean	cytosol	38.78	40.18
Solyc04g050780.1.1	Tomato	cytosol	35.95	38.28
PGSC0003DMT400011486	Potato	cytosol	29.41	37.82
Solyc04g050770.1.1	Tomato	cytosol	35.08	36.34
PGSC0003DMT400039084	Potato	cytosol	35.08	36.34
AT5G18320.1	Thale cress	cytosol	32.03	32.1
CDY68352	Canola	cytosol	31.59	31.8
CDY38506	Canola	cytosol	31.59	31.8
AT5G18330.1	Thale cress	cytosol	27.45	28.31
AT5G18340.1	Thale cress	nucleus	28.1	28.29
CDX70810	Canola	cytosol	28.1	27.33
Os06t0726900-00	Rice	cytosol	22.44	27.11
Bra006451.1-P	Field mustard	cytosol	26.8	26.34
Os06t0102700-01	Rice	plasma membrane	33.77	25.66
Os12t0570000-01	Rice	cytosol	28.76	25.53
Os07t0587500-01	Rice	cytosol	19.61	24.86
CDY51235	Canola	extracellular, golgi	26.8	23.7
Os02t0732200-01	Rice	cytosol	31.81	22.92
Os08t0481200-01	Rice	cytosol	30.94	22.12
Os03t0275900-01	Rice	cytosol	32.9	20.8
Os02t0234300-01	Rice	cytosol	24.84	19.62
Os07t0584900-01	Rice	plastid	19.61	19.27
Os01t0823900-01	Rice	plastid	28.1	18.97
Os05t0476700-01	Rice	plastid	27.45	18.61
Os03t0435300-00	Rice	cytosol	15.69	18.0
Os01t0884400-01	Rice	plasma membrane	30.07	16.47
Os08t0110500-01	Rice	plasma membrane	28.32	15.78
Os09t0378700-00	Rice	plasma membrane, plastid	21.35	13.76
Os08t0415600-00	Rice	cytosol	19.61	12.55
Bra002153.1-P	Field mustard	cytosol	32.24	10.83
CDX70805	Canola	cytosol	27.67	8.24
CDY51234	Canola	cytosol	28.54	7.91
Bra006452.1-P	Field mustard	cytosol	28.54	7.89

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	EntrezGene:4335543	EMBL:AK243053	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	UniProt:B7F9Y0	ProteinID:BAF14436.2	ProteinID:BAS88708.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	EnsemblPlantsGene:Os04g0348400	EnsemblPlants:Os04t0348400-01	PFAM:PF00514	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF121	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000188B010	InterPro:Ubox_domain	RefSeq:XP_015633809.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

plant U-box-containing protein 7, U-box protein 7Similar to OSIGBa0130K07.9 protein. (Os04t0348400-01)

Coordinates

chr4:-:16590486..16593924

Molecular Weight (calculated)

49864.8 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.168

Length

459 amino acids

Sequence
(BLAST)

001: MAKPAPAPAA GAREDEDAPA LRRRLRRLVA AATAGAASES VLDEAAAALA ALRDAEVGVG RKGVGGGEEA AAAAVPALFL CPISSGIMRD PVVIESGQTY
101: DRRSIQEWFS AGNQICPQTQ QVLSHTIVIP NHLVRTMISQ WCTENGLTLP EIENQEQDHV TNSEEKTFDE IFVKITSSAN SGGRKQAIKD LRLLTKRNSE
201: FRAVLGQRPD SIAQMILARS TPGLQNDPQV LEDMVTIILN FSIHDSNKKI IGDDSEAIQF LIWALKSGDM GSRSNSAAAI FTLSALDSNK EKIGKLGAMD
301: PLIDLLEHGS IIAKKDAASA IFNLCLLHEN RSIAARSGIV DVAMRAIDDQ SLVEESLAIL ALLSRNQEMV EIITEFNGTA SMLRSIRESE CKRSKENAMV
401: VLFAICTYNR TKLKEVEADE SINGSLTFLA QTGTQRARRK ASGILEKMKR TMHNRHCSC

Best Arabidopsis Sequence Match ( AT3G07360.1 )
(BLAST)

001: MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IDDEDDLGVQ TIDQLQDALS ALREATMRKM AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA

Arabidopsis Description

PUB9RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.