Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001247.1-P | Field mustard | cytosol | 97.37 | 97.37 |
| CDY08002 | Canola | cytosol | 96.49 | 96.7 |
| CDY28059 | Canola | cytosol | 90.79 | 89.61 |
| CDY71737 | Canola | cytosol | 90.35 | 89.18 |
| AT3G07360.1 | Thale cress | cytosol | 89.04 | 88.26 |
| VIT_00s0524g00030.t01 | Wine grape | cytosol | 58.99 | 59.91 |
| PGSC0003DMT400016998 | Potato | cytosol | 58.33 | 59.24 |
| Solyc09g056450.2.1 | Tomato | cytosol | 57.89 | 58.8 |
| KRH46608 | Soybean | cytosol | 58.99 | 58.35 |
| KRG99581 | Soybean | cytosol | 58.55 | 57.92 |
| VIT_04s0043g00840.t01 | Wine grape | cytosol | 57.02 | 57.14 |
| KRH68828 | Soybean | cytosol | 51.75 | 54.88 |
| KRG97080 | Soybean | cytosol, nucleus | 51.97 | 53.86 |
| GSMUA_Achr6P06560_001 | Banana | cytosol | 43.64 | 53.35 |
| GSMUA_Achr10P... | Banana | cytosol | 41.45 | 50.53 |
| GSMUA_Achr9P01670_001 | Banana | cytosol | 50.66 | 49.57 |
| PGSC0003DMT400011486 | Potato | cytosol | 37.94 | 48.46 |
| KRG92593 | Soybean | cytosol | 46.71 | 48.08 |
| Os02t0488600-01 | Rice | cytosol, nucleus | 44.3 | 47.75 |
| Solyc04g050780.1.1 | Tomato | cytosol | 44.52 | 47.1 |
| PGSC0003DMT400039084 | Potato | cytosol | 45.18 | 46.5 |
| Solyc04g050770.1.1 | Tomato | cytosol | 44.08 | 45.37 |
| Zm00001d016501_P001 | Maize | cytosol | 46.05 | 45.16 |
| EES06804 | Sorghum | cytosol | 45.39 | 44.61 |
| Os04t0348400-01 | Rice | cytosol | 43.64 | 43.36 |
| TraesCS2D01G275400.1 | Wheat | nucleus | 43.42 | 43.04 |
| TraesCS2B01G294100.1 | Wheat | nucleus | 43.42 | 43.04 |
| TraesCS2A01G276400.1 | Wheat | nucleus | 43.42 | 43.04 |
| HORVU2Hr1G067610.6 | Barley | cytosol | 44.08 | 42.41 |
| CDY68352 | Canola | cytosol | 39.04 | 39.04 |
| CDY38506 | Canola | cytosol | 38.6 | 38.6 |
| CDY28679 | Canola | cytosol | 20.18 | 34.98 |
| CDX70810 | Canola | cytosol | 32.46 | 31.36 |
| CDX74298 | Canola | plastid | 22.37 | 28.81 |
| CDY32692 | Canola | peroxisome | 21.93 | 28.33 |
| CDX91947 | Canola | plastid | 21.93 | 28.33 |
| CDY51235 | Canola | extracellular, golgi | 31.58 | 27.75 |
| CDY02828 | Canola | cytosol | 21.05 | 27.12 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 33.99 | 26.36 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 34.65 | 25.99 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 34.65 | 25.94 |
| CDY12497 | Canola | cytosol | 33.77 | 25.8 |
| CDX78273 | Canola | cytosol | 35.31 | 25.39 |
| CDX96295 | Canola | cytosol, plasma membrane | 34.21 | 25.32 |
| CDX72769 | Canola | cytosol | 33.33 | 24.84 |
| CDY31736 | Canola | cytosol | 34.65 | 24.61 |
| CDX77213 | Canola | cytosol | 34.21 | 24.26 |
| CDX68379 | Canola | cytosol | 33.77 | 23.4 |
| CDX99112 | Canola | cytosol | 33.55 | 23.36 |
| CDX86080 | Canola | cytosol | 33.55 | 23.32 |
| CDY68037 | Canola | cytosol | 32.89 | 22.9 |
| CDX95193 | Canola | cytosol | 32.68 | 22.75 |
| CDX68380 | Canola | cytosol | 26.1 | 22.37 |
| CDY04747 | Canola | cytosol, golgi | 21.49 | 22.22 |
| CDY09688 | Canola | cytosol | 21.05 | 21.15 |
| CDX90518 | Canola | plastid | 20.83 | 20.88 |
| CDX78262 | Canola | cytosol | 31.36 | 20.37 |
| CDX73449 | Canola | cytosol | 31.36 | 20.31 |
| CDY18649 | Canola | cytosol, plastid | 31.36 | 20.08 |
| CDX81323 | Canola | cytosol, plastid | 31.36 | 19.78 |
| CDX76873 | Canola | cytosol, plastid | 32.24 | 19.68 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 31.14 | 19.24 |
| CDY02891 | Canola | cytosol | 30.92 | 19.13 |
| CDY48332 | Canola | mitochondrion, plastid | 29.17 | 18.89 |
| CDX90186 | Canola | mitochondrion | 29.39 | 18.79 |
| CDX94661 | Canola | plastid | 28.95 | 18.57 |
| CDY31406 | Canola | cytosol | 27.41 | 18.55 |
| CDY57440 | Canola | cytosol | 26.75 | 18.51 |
| CDY43332 | Canola | mitochondrion | 29.17 | 18.5 |
| CDY12838 | Canola | cytosol | 28.29 | 18.45 |
| CDX71307 | Canola | cytosol | 27.19 | 18.43 |
| CDX99816 | Canola | plastid | 29.17 | 18.37 |
| CDY37666 | Canola | cytosol, plastid | 25.88 | 17.85 |
| CDX73439 | Canola | plastid | 34.87 | 17.65 |
| CDY43686 | Canola | plastid | 25.44 | 17.55 |
| CDY38931 | Canola | cytosol | 23.25 | 17.24 |
| CDY24520 | Canola | cytosol | 23.68 | 16.02 |
| CDY54132 | Canola | cytosol | 23.68 | 15.88 |
| CDY55050 | Canola | cytosol | 24.12 | 15.8 |
| CDX93411 | Canola | mitochondrion | 24.12 | 15.76 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 31.8 | 14.04 |
| CDY04344 | Canola | cytosol | 9.21 | 13.17 |
| CDY04342 | Canola | cytosol | 8.99 | 12.31 |
| CDX70805 | Canola | cytosol | 32.68 | 9.67 |
| CDY51234 | Canola | cytosol | 33.77 | 9.29 |
Protein Annotations
| MapMan:19.2.2.1.5.2.1 | Gene3D:3.30.40.10 | GO:A0A078CBA4 | InterPro:ARM-type_fold | InterPro:Armadillo | EnsemblPlants:CDX74050 |
| ProteinID:CDX74050 | ProteinID:CDX74050.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00111796001 | InterPro:IPR000225 | InterPro:IPR003613 |
| InterPro:IPR013083 | PFAM:PF00514 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF227 |
| SMART:SM00185 | SMART:SM00504 | SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EDDB59 |
| InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD | : | : | : | : |
Description
BnaA03g29970D
Coordinates
chrLK031800:-:1081471..1083508
Molecular Weight (calculated)
50535.0 Da
IEP (calculated)
8.151
GRAVY (calculated)
-0.243
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTGFFDSD PTAIAKAKEL KREMKKLLSN IEEEDGLSVQ TIDQLQEALS AFRQATTMRK MAKSSSLEML ETAVSCPDEF RCPLSNELMR DPVVLASGQT
101: YDKLFIQRWL SSGNRTCPKT EQVLPHTALT PNVLIRDMIS KWCKTVGLET NNLYESKKAV TRSDREVFNS LLCKVSSSSN VQDQRSAAKE LRLLTKKGTE
201: FRALFGESSE GITRLVSPLL VNQDEQLQED VVTTLLNISI HDDSNKKLVC ENPNVIPLLI DALTRGTVAT RSNAAAAIFT LSALDSNKAL IGKSGILKPL
301: IDLLEEGNPL AIKDAAAAIF TLCIAHENRS RAVKDGAVRV LGKKISEGLY VDELLALLAM LVTHWKAVEE LGELGGVSWL LEITRESECK RNKENAIVIL
401: HTICFSDRTK WKEIREEESG HGTITRLARE GTSRAQRKAN GILDRLRKAM NLTHTA
101: YDKLFIQRWL SSGNRTCPKT EQVLPHTALT PNVLIRDMIS KWCKTVGLET NNLYESKKAV TRSDREVFNS LLCKVSSSSN VQDQRSAAKE LRLLTKKGTE
201: FRALFGESSE GITRLVSPLL VNQDEQLQED VVTTLLNISI HDDSNKKLVC ENPNVIPLLI DALTRGTVAT RSNAAAAIFT LSALDSNKAL IGKSGILKPL
301: IDLLEEGNPL AIKDAAAAIF TLCIAHENRS RAVKDGAVRV LGKKISEGLY VDELLALLAM LVTHWKAVEE LGELGGVSWL LEITRESECK RNKENAIVIL
401: HTICFSDRTK WKEIREEESG HGTITRLARE GTSRAQRKAN GILDRLRKAM NLTHTA
001: MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IDDEDDLGVQ TIDQLQDALS ALREATMRKM AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA
Arabidopsis Description
PUB9RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.