Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027977.1-P | Field mustard | cytosol | 98.32 | 98.77 |
| CDX95193 | Canola | cytosol | 97.86 | 97.86 |
| AT5G42340.1 | Thale cress | cytosol | 85.95 | 85.3 |
| KRH40395 | Soybean | cytosol | 61.07 | 62.99 |
| KRH00831 | Soybean | cytosol | 60.31 | 62.2 |
| VIT_18s0001g14180.t01 | Wine grape | cytosol | 60.0 | 57.46 |
| Solyc12g094610.1.1 | Tomato | cytosol | 46.87 | 57.17 |
| KRH33490 | Soybean | cytosol | 45.8 | 57.14 |
| PGSC0003DMT400025648 | Potato | cytosol | 56.49 | 57.01 |
| Solyc04g082440.2.1 | Tomato | cytosol | 56.03 | 56.55 |
| PGSC0003DMT400075612 | Potato | cytosol | 55.11 | 55.97 |
| GSMUA_Achr4P04900_001 | Banana | cytosol | 44.89 | 55.68 |
| GSMUA_Achr4P05030_001 | Banana | cytosol | 44.12 | 55.15 |
| Os08t0481200-01 | Rice | cytosol | 50.99 | 52.02 |
| TraesCS7B01G186600.1 | Wheat | cytosol | 51.15 | 52.02 |
| KXG20946 | Sorghum | cytosol | 50.84 | 51.79 |
| TraesCS7A01G293900.1 | Wheat | cytosol | 50.84 | 51.71 |
| TraesCS7D01G289800.1 | Wheat | cytosol | 50.84 | 51.71 |
| HORVU7Hr1G061800.2 | Barley | cytosol | 50.69 | 51.55 |
| Zm00001d014845_P001 | Maize | cytosol | 50.23 | 51.33 |
| TraesCS7D01G536300.1 | Wheat | cytosol | 50.23 | 51.01 |
| HORVU7Hr1G121810.1 | Barley | cytosol | 49.77 | 50.86 |
| TraesCS7A01G549700.1 | Wheat | cytosol | 50.08 | 50.77 |
| EES15482 | Sorghum | cytosol | 49.47 | 50.39 |
| Zm00001d031263_P001 | Maize | cytosol | 48.85 | 49.61 |
| TraesCS7B01G473200.1 | Wheat | cytosol | 50.08 | 48.66 |
| Os06t0726900-00 | Rice | cytosol | 26.56 | 45.79 |
| CDY28679 | Canola | cytosol | 16.49 | 41.06 |
| CDX68380 | Canola | cytosol | 33.28 | 40.98 |
| CDX78273 | Canola | cytosol | 38.78 | 40.06 |
| CDX99112 | Canola | cytosol | 39.85 | 39.85 |
| CDX86080 | Canola | cytosol | 39.85 | 39.79 |
| CDX68379 | Canola | cytosol | 39.54 | 39.36 |
| CDX77213 | Canola | cytosol | 38.32 | 39.04 |
| CDY31736 | Canola | cytosol | 37.86 | 38.63 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.67 | 36.39 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 32.98 | 35.47 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 32.82 | 35.36 |
| CDX74298 | Canola | plastid | 19.08 | 35.31 |
| CDY12497 | Canola | cytosol | 32.06 | 35.18 |
| CDX96295 | Canola | cytosol, plasma membrane | 32.52 | 34.58 |
| CDX91947 | Canola | plastid | 18.63 | 34.56 |
| CDX72769 | Canola | cytosol | 31.91 | 34.15 |
| CDY32692 | Canola | peroxisome | 17.86 | 33.14 |
| CDX74050 | Canola | cytosol | 22.9 | 32.89 |
| CDY02828 | Canola | cytosol | 17.71 | 32.77 |
| CDY71737 | Canola | cytosol | 23.05 | 32.68 |
| CDY04747 | Canola | cytosol, golgi | 21.98 | 32.65 |
| CDY28059 | Canola | cytosol | 22.75 | 32.25 |
| CDY08002 | Canola | cytosol | 22.14 | 31.87 |
| CDY68352 | Canola | cytosol | 20.61 | 29.61 |
| CDY38506 | Canola | cytosol | 20.46 | 29.39 |
| CDX76873 | Canola | cytosol, plastid | 32.67 | 28.65 |
| CDX90186 | Canola | mitochondrion | 30.69 | 28.19 |
| CDX73439 | Canola | plastid | 38.47 | 27.97 |
| CDY48332 | Canola | mitochondrion, plastid | 29.92 | 27.84 |
| CDX73449 | Canola | cytosol | 29.92 | 27.84 |
| CDY02891 | Canola | cytosol | 31.3 | 27.82 |
| CDY18649 | Canola | cytosol, plastid | 30.23 | 27.81 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 31.3 | 27.78 |
| CDY43332 | Canola | mitochondrion | 30.23 | 27.54 |
| CDX78262 | Canola | cytosol | 29.47 | 27.49 |
| CDX81323 | Canola | cytosol, plastid | 30.23 | 27.39 |
| CDX99816 | Canola | plastid | 29.92 | 27.07 |
| CDX94661 | Canola | plastid | 29.31 | 27.0 |
| CDX90518 | Canola | plastid | 18.17 | 26.15 |
| CDX71307 | Canola | cytosol | 26.87 | 26.15 |
| CDY31406 | Canola | cytosol | 26.87 | 26.11 |
| CDY57440 | Canola | cytosol | 26.26 | 26.1 |
| CDY09688 | Canola | cytosol | 18.02 | 25.99 |
| CDY12838 | Canola | cytosol | 27.18 | 25.46 |
| CDY37666 | Canola | cytosol, plastid | 25.5 | 25.26 |
| CDY43686 | Canola | plastid | 25.34 | 25.11 |
| CDX70810 | Canola | cytosol | 17.71 | 24.58 |
| CDY38931 | Canola | cytosol | 22.6 | 24.07 |
| CDY24520 | Canola | cytosol | 23.21 | 22.55 |
| CDY54132 | Canola | cytosol | 23.36 | 22.5 |
| CDY51235 | Canola | extracellular, golgi | 16.95 | 21.39 |
| CDY55050 | Canola | cytosol | 22.44 | 21.12 |
| CDX93411 | Canola | mitochondrion | 22.44 | 21.06 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 32.67 | 20.72 |
| CDY04344 | Canola | cytosol | 8.85 | 18.18 |
| CDY04342 | Canola | cytosol | 8.85 | 17.42 |
| CDX70805 | Canola | cytosol | 17.71 | 7.53 |
| CDY51234 | Canola | cytosol | 17.71 | 7.0 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078JRI1 | UniProt:A0A078JRI1 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Armadillo | EnsemblPlants:CDY68037 | ProteinID:CDY68037 | ProteinID:CDY68037.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00069136001 |
| InterPro:IPR000225 | InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | PFAM:PF00514 | PFAM:PF04564 |
| PFscan:PS50176 | PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF49 | SMART:SM00185 | SMART:SM00504 |
| SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE54FA | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g53450DRING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A078JRI1]
Coordinates
chrLK036792:+:1725..4205
Molecular Weight (calculated)
73364.4 Da
IEP (calculated)
4.655
GRAVY (calculated)
-0.206
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVMDLDEEA TREGENIEEV VNAEESIDDE AIDIHEEEVG DVKDDLVGEI ITTIEFVDQI SDYRRTQQKE CFNLVRRLKI LIPFMDEIRG FEFPSPESCM
101: RFLNRLRKVI LAARKLLETC NNGSKIFLAL DSELIMTRFH SIYEKLNRVL VKTPFDELRI SDEVKDEVGS LCKQLKKARR RTDTQDIELA VDMMVMFSKT
201: DPRNSDSAII ERLAKKLELQ TIEDLKTETI AIKALVQEKG GLSVETKQHI IELLNKFKKL QGVEATDVLY EPVINKSTSL ILPHEFLCPI TLEIMQDPVI
301: IATGQTYEKE GIQKWFDAGH KTCPKTGQTL DHLSLAPNYA LKNIILQWCE KNNFKIPEKE TSLHSENDSE EQKDEVSLLV EALSSSQLEE QRASVKQMRL
401: LAKENPENRV LIANAGAIPL LVQLLSYPDS GIQENAVTTL LNLSIDETNK KLISDEGAIP DIIEILQNGT REARENSAAA LFSLSMLDEN KVTIGLSDGI
501: PPLVELLQHG TSRGKKDALT ALFNLSLNSA NKGRAIDAGI VQPLLQLLKD RNLGMIDEAL SILLLLVSHP EGRQAIGQLS FIETLVDFIR QGTPKNKECA
601: ASVLLELGSN NSSFILAALQ FGVYEYLVEI TSSGTNRAQR KANALIQLIS KSEQI
101: RFLNRLRKVI LAARKLLETC NNGSKIFLAL DSELIMTRFH SIYEKLNRVL VKTPFDELRI SDEVKDEVGS LCKQLKKARR RTDTQDIELA VDMMVMFSKT
201: DPRNSDSAII ERLAKKLELQ TIEDLKTETI AIKALVQEKG GLSVETKQHI IELLNKFKKL QGVEATDVLY EPVINKSTSL ILPHEFLCPI TLEIMQDPVI
301: IATGQTYEKE GIQKWFDAGH KTCPKTGQTL DHLSLAPNYA LKNIILQWCE KNNFKIPEKE TSLHSENDSE EQKDEVSLLV EALSSSQLEE QRASVKQMRL
401: LAKENPENRV LIANAGAIPL LVQLLSYPDS GIQENAVTTL LNLSIDETNK KLISDEGAIP DIIEILQNGT REARENSAAA LFSLSMLDEN KVTIGLSDGI
501: PPLVELLQHG TSRGKKDALT ALFNLSLNSA NKGRAIDAGI VQPLLQLLKD RNLGMIDEAL SILLLLVSHP EGRQAIGQLS FIETLVDFIR QGTPKNKECA
601: ASVLLELGSN NSSFILAALQ FGVYEYLVEI TSSGTNRAQR KANALIQLIS KSEQI
001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI
Arabidopsis Description
PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.