Factsheet for TraesCS7A01G293900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G289800.1	Wheat	cytosol	98.6	98.6
TraesCS7B01G186600.1	Wheat	cytosol	97.83	97.83
HORVU7Hr1G061800.2	Barley	cytosol	95.96	95.96
Os08t0481200-01	Rice	cytosol	81.21	81.46
EES15482	Sorghum	cytosol	79.35	79.47
Zm00001d031263_P001	Maize	cytosol	78.26	78.14
TraesCS7A01G549700.1	Wheat	cytosol	70.03	69.81
GSMUA_Achr4P05030_001	Banana	cytosol	51.24	62.98
GSMUA_Achr4P04900_001	Banana	cytosol	50.78	61.93
VIT_03s0038g03660.t01	Wine grape	cytosol	56.68	56.94
KRH40395	Soybean	cytosol	53.57	54.33
KRH00831	Soybean	cytosol	52.8	53.54
PGSC0003DMT400025648	Potato	cytosol	51.86	51.46
Solyc04g082440.2.1	Tomato	cytosol	51.71	51.31
CDY68037	Canola	cytosol	51.71	50.84
Solyc12g094610.1.1	Tomato	cytosol	42.39	50.84
CDX95193	Canola	cytosol	51.55	50.69
Bra027977.1-P	Field mustard	cytosol	51.24	50.61
VIT_18s0001g14180.t01	Wine grape	cytosol	52.8	49.71
PGSC0003DMT400075612	Potato	cytosol	49.53	49.46
AT5G42340.1	Thale cress	cytosol	49.84	48.64
KRH33490	Soybean	cytosol	38.66	47.43
TraesCS7A01G001900.1	Wheat	cytosol	33.07	40.19
TraesCS4A01G498700.1	Wheat	plastid	36.49	37.12
TraesCS5A01G078400.1	Wheat	cytosol	38.98	36.7
TraesCS6A01G293600.1	Wheat	cytosol	35.09	35.26
TraesCS4A01G097700.1	Wheat	cytosol	39.13	35.24
TraesCS2A01G276400.1	Wheat	nucleus	21.58	30.22
TraesCS2A01G193000.1	Wheat	cytosol	15.53	27.7
TraesCS1A01G300000.1	Wheat	cytosol	25.78	24.85
TraesCS3A01G390200.1	Wheat	cytosol	16.93	24.83
TraesCS2A01G190800.1	Wheat	cytosol	16.77	24.77
TraesCS6A01G190700.1	Wheat	plastid	27.8	24.69
TraesCS3A01G345800.1	Wheat	plastid	26.09	24.6
TraesCS5A01G198800.1	Wheat	cytosol, plasma membrane	25.62	23.54
TraesCS3A01G521300.1	Wheat	cytosol	29.81	23.1
TraesCS2A01G475600.1	Wheat	cytosol, plasma membrane	23.76	22.14
TraesCS3A01G410100.1	Wheat	cytosol	17.7	21.55
TraesCS3A01G410000.1	Wheat	cytosol	19.41	19.72

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564
PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF49	SMART:SM00185	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7A01G293900	EnsemblPlants:TraesCS7A01G293900.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16664	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:377635211..377637453

Molecular Weight (calculated)

71252.7 Da

IEP (calculated)

7.304

GRAVY (calculated)

-0.223

Length

644 amino acids

Sequence
(BLAST)

001: MPQPALPPSA AATADPEPSG TRAREMDDED LVEELLATVN SARAYSEFRR TQRKECHNLL RWLQLILPLL EELRDSAPRL TDDAYRRLTL LGRALSAARR
101: LLRSCNDGSK IFLALESEAV LGRFRAVYEK MNSALDGMPY AELAISDEVT EQVELMNAQL MRCKKRTDTQ DIELSMDLMV ILQNNKDEER NADGAILDRL
201: ASKLELQMLP DLRAETVAIK KLINERNGQH ADSTKQIIEL LHKFKAIAGI DEKNVLGSEV FVTKSLDKCP SLMIPDDFLC PITLEIMTDP VIVASGQTYE
301: RRSIQKWLDS GERTCPKMRQ PLAHLSLAPN YALKNLILQW CDKHKVELQR REPEPVAEQD GHPREDIPSL VEALSSIHPD VQRKAAKKVR MLSKESPENR
401: ALIVGNGGIP ALIGLLAYPD KKVQENTVTS LLNLSIDHGN KLLITKGGAI PLIIEILRNG SAEGQENSAA TLFSLSMLDE NKATIGTLGG IAPLVELLTN
501: GTVRGKKDAT TAIFNLILNQ QNKVRATQAG IVPALMKVID DRSLGMVDEA LSIFLLLSSH PTCLGEIGTT PFVEKLVQLI KEGTPKNKEC ALSVLLELGS
601: KKQTLLVHAL RFGLHEHLSQ IAKTGTSRAQ RKANSLIQIA KKCY

Best Arabidopsis Sequence Match ( AT5G42340.1 )
(BLAST)

001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI

Arabidopsis Description

PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.