Factsheet for Bra027977.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68037	Canola	cytosol	98.77	98.32
AT5G42340.1	Thale cress	cytosol	86.35	85.3
KRH40395	Soybean	cytosol	61.04	62.68
KRH00831	Soybean	cytosol	60.43	62.05
VIT_18s0001g14180.t01	Wine grape	cytosol	59.82	57.02
KRH33490	Soybean	cytosol	45.86	56.95
Solyc12g094610.1.1	Tomato	cytosol	46.78	56.8
PGSC0003DMT400025648	Potato	cytosol	56.29	56.55
Solyc04g082440.2.1	Tomato	cytosol	55.98	56.24
PGSC0003DMT400075612	Potato	cytosol	55.06	55.66
GSMUA_Achr4P04900_001	Banana	cytosol	44.63	55.11
GSMUA_Achr4P05030_001	Banana	cytosol	43.71	54.39
Os08t0481200-01	Rice	cytosol	50.92	51.71
KXG20946	Sorghum	cytosol	50.92	51.63
TraesCS7B01G186600.1	Wheat	cytosol	50.92	51.55
TraesCS7A01G293900.1	Wheat	cytosol	50.61	51.24
TraesCS7D01G289800.1	Wheat	cytosol	50.61	51.24
Zm00001d014845_P001	Maize	cytosol	50.31	51.17
HORVU7Hr1G061800.2	Barley	cytosol	50.31	50.93
TraesCS7D01G536300.1	Wheat	cytosol	50.31	50.85
HORVU7Hr1G121810.1	Barley	cytosol	49.85	50.7
TraesCS7A01G549700.1	Wheat	cytosol	50.15	50.62
EES15482	Sorghum	cytosol	49.23	49.92
Zm00001d031263_P001	Maize	cytosol	48.77	49.3
TraesCS7B01G473200.1	Wheat	cytosol	50.15	48.52
Os06t0726900-00	Rice	cytosol	26.69	45.79
Bra040513.1-P	Field mustard	cytosol	16.72	41.44
Bra007105.1-P	Field mustard	cytosol	38.96	40.06
Bra018212.1-P	Field mustard	cytosol	39.26	39.32
Bra033820.1-P	Field mustard	cytosol	39.11	38.75
Bra035665.1-P	Field mustard	cytosol	37.88	37.88
Bra012355.1-P	Field mustard	plasma membrane	32.67	36.22
Bra024559.1-P	Field mustard	cytosol, plasma membrane	32.98	35.3
Bra001006.1-P	Field mustard	plastid	18.86	34.75
Bra016165.1-P	Field mustard	cytosol, plasma membrane	32.67	34.58
Bra001247.1-P	Field mustard	cytosol	23.01	32.89
Bra040374.1-P	Field mustard	cytosol	22.55	32.59
Bra020360.1-P	Field mustard	cytosol	17.64	32.58
Bra029642.1-P	Field mustard	cytosol	22.85	32.25
Bra001998.1-P	Field mustard	cytosol	25.61	27.97
Bra032309.1-P	Field mustard	plastid	30.06	27.84
Bra014787.1-P	Field mustard	cytosol	31.29	27.64
Bra010834.1-P	Field mustard	mitochondrion	30.06	27.26
Bra037117.1-P	Field mustard	cytosol, plastid	30.67	27.25
Bra007097.1-P	Field mustard	cytosol	29.29	27.21
Bra038470.1-P	Field mustard	plastid	19.17	26.71
Bra012713.1-P	Field mustard	cytosol	18.25	26.15
Bra019022.1-P	Field mustard	cytosol	26.84	25.96
Bra012155.1-P	Field mustard	cytosol	26.07	25.8
Bra032180.1-P	Field mustard	cytosol	22.55	25.17
Bra021899.1-P	Field mustard	plastid	25.15	24.81
Bra006451.1-P	Field mustard	cytosol	16.87	23.55
Bra031521.1-P	Field mustard	cytosol	23.31	22.45
Bra019924.1-P	Field mustard	mitochondrion	22.39	21.01
Bra002153.1-P	Field mustard	cytosol	21.32	10.18
Bra006452.1-P	Field mustard	cytosol	17.94	7.04

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
EnsemblPlantsGene:Bra027977	EnsemblPlants:Bra027977.1	EnsemblPlants:Bra027977.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	UniProt:M4EGR3	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF49	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000254229B	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT5G42340 (E=7e-294) | binding / ubiquitin-protein ligase

Coordinates

chrA09:+:10277393..10279887

Molecular Weight (calculated)

73163.1 Da

IEP (calculated)

4.734

GRAVY (calculated)

-0.221

Length

652 amino acids

Sequence
(BLAST)

001: MDLDEEATRE RESIEEVVNA EESIDDEAID IHEEEVSDVK DDLVSEIITT IEFLDQISDY RRTQQKECFN LVRRLKILIR FMDEIRGFEF PSPASCMHFL
101: NRLRKVILAA RKLLETCNNG SKIFLALDSE LIMTRFHSIY EKLNRVLVKT PFDELRISDE VKDEVGSLCK QLKKARRRTD TQDIELAVDM MVMFSKTDPR
201: NSDSAIIERL AKKLELQTIE DLKTETIAIK ALVQEKGGLS VETKQHIIEL LNKFKKLQGV EATDVLYEPV INKSTSLILP HEFLCPITLE IMQDPVIIAT
301: GQTYEKEGIQ KWFDAGHKTC PKTGQTLDHL SLAPNYALKN IILQWCEKNN FKIPEKETSL HSENDSEEQK DEVSLLVEAL SSSQLEEQRA SVKQMRLLAK
401: ENPENRVLIA NAGAIPLLVQ LLSYPDSGIQ ENAVTTLLNL SIDETNKKLI SDEGAIPDII EILQNGTREA RENSAAALFS LSMLDENKVT IGLSDGIPPL
501: VELLQHGTSR GKKDALTALF NLSLNSANKG RAIDAGIVQP LLQLLKDRNL GMIDEALSIL LLLVSHPEGR QAIGQLSFIE TLVDFIRQGT PKNKECAASV
601: LLELGSNNSS FILAALQFGV YEYLVEITSS GTNRAQRKAN ALIQLISKSE QI

Best Arabidopsis Sequence Match ( AT5G42340.1 )
(BLAST)

001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI

Arabidopsis Description

PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.