Factsheet for Bra037117.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18649	Canola	cytosol, plastid	96.32	99.3
AT5G67340.1	Thale cress	cytosol	77.25	80.2
Bra012155.1-P	Field mustard	cytosol	62.26	69.35
KRH17146	Soybean	cytosol	22.48	69.33
TraesCS3B01G443200.1	Wheat	cytosol, endoplasmic reticulum	22.34	64.57
GSMUA_Achr9P12570_001	Banana	cytosol	24.93	61.0
GSMUA_Achr4P01530_001	Banana	plasma membrane	44.41	53.36
Bra040513.1-P	Field mustard	cytosol	17.17	47.91
VIT_07s0129g00590.t01	Wine grape	cytosol	54.09	46.82
Solyc01g014230.2.1	Tomato	cytosol	51.63	46.73
PGSC0003DMT400046295	Potato	cytosol	52.18	46.65
Solyc12g100000.1.1	Tomato	cytosol, plastid	51.91	46.52
KRH72794	Soybean	plasma membrane	50.95	46.0
TraesCS3B01G422200.1	Wheat	cytosol	27.66	45.93
TraesCS3D01G382500.1	Wheat	cytosol	27.66	45.93
TraesCS3A01G390200.1	Wheat	cytosol	27.38	45.79
KRH30135	Soybean	cytosol	52.18	45.7
HORVU3Hr1G081380.1	Barley	cytosol	27.52	45.7
KRG98177	Soybean	cytosol	52.18	45.54
Bra032180.1-P	Field mustard	cytosol	33.52	42.12
Os08t0110500-01	Rice	plasma membrane	45.91	40.9
TraesCS3A01G521300.1	Wheat	cytosol	46.05	40.67
TraesCS3D01G527900.1	Wheat	cytosol	45.91	40.55
TraesCS3B01G591000.1	Wheat	cytosol	45.78	40.43
HORVU3Hr1G113910.3	Barley	cytosol	45.91	40.21
Bra007097.1-P	Field mustard	cytosol	38.42	40.17
Bra001006.1-P	Field mustard	plastid	18.94	39.27
Bra014787.1-P	Field mustard	cytosol	39.1	38.89
EES01872	Sorghum	cytosol	42.64	38.88
Os01t0884400-01	Rice	plasma membrane	43.87	38.42
Zm00001d035040_P007	Maize	mitochondrion	45.64	38.42
Bra020360.1-P	Field mustard	cytosol	18.39	38.24
TraesCS3B01G443500.1	Wheat	cytosol	26.84	37.24
TraesCS3A01G410100.1	Wheat	cytosol	26.7	37.05
PGSC0003DMT400027406	Potato	cytosol	13.35	36.7
Zm00001d049708_P007	Maize	cytosol	43.87	36.51
Bra012713.1-P	Field mustard	cytosol	21.53	34.73
Bra007105.1-P	Field mustard	cytosol	29.43	34.07
Zm00001d042608_P002	Maize	cytosol	42.51	33.73
Bra038470.1-P	Field mustard	plastid	21.39	33.55
Bra012355.1-P	Field mustard	plasma membrane	26.84	33.5
Bra018212.1-P	Field mustard	cytosol	29.7	33.49
EES14396	Sorghum	cytosol	45.78	33.37
Bra033820.1-P	Field mustard	cytosol	29.7	33.13
TraesCS3A01G410000.1	Wheat	cytosol	28.61	33.12
Bra024559.1-P	Field mustard	cytosol, plasma membrane	27.25	32.84
Bra040374.1-P	Field mustard	cytosol	19.89	32.37
Bra016165.1-P	Field mustard	cytosol, plasma membrane	26.7	31.82
Bra029642.1-P	Field mustard	cytosol	19.75	31.39
Bra001247.1-P	Field mustard	cytosol	19.48	31.36
Bra035665.1-P	Field mustard	cytosol	27.66	31.14
Bra027977.1-P	Field mustard	cytosol	27.25	30.67
Bra021899.1-P	Field mustard	plastid	24.52	27.23
Bra001998.1-P	Field mustard	cytosol	21.8	26.8
Bra010834.1-P	Field mustard	mitochondrion	25.89	26.43
Bra032309.1-P	Field mustard	plastid	25.34	26.42
Bra019022.1-P	Field mustard	cytosol	23.02	25.07
Bra006451.1-P	Field mustard	cytosol	15.12	23.77
Bra031521.1-P	Field mustard	cytosol	18.53	20.09
Bra019924.1-P	Field mustard	mitochondrion	18.94	20.0
Bra002153.1-P	Field mustard	cytosol	17.71	9.52
Bra006452.1-P	Field mustard	cytosol	15.8	6.98

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
EnsemblPlantsGene:Bra037117	EnsemblPlants:Bra037117.1	EnsemblPlants:Bra037117.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	UniProt:M4F7Q6	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF7	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI0002541D7D	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT5G67340 (E=1e-156) | armadillo/beta-catenin repeat family protein / U-box domain-containing protein

Coordinates

chrA09:+:4389079..4391712

Molecular Weight (calculated)

80302.9 Da

IEP (calculated)

4.895

GRAVY (calculated)

-0.168

Length

734 amino acids

Sequence
(BLAST)

001: MEVSWLRVLL DNISSYLSIS SMDTLYSNPA HKYYTRGEDI AKLLQPVLEN LVGSDASPSE LLNNGFEELS QYIDELREQF QSWEPLSSRI FYVLQIESLA
101: TKLRESSLEV FQLLKHCEQH LPADLVSPSF EDCIELVKLV GRDEVSCTID LALIDQKEGN GPTSEVLVKI AESVGLRSNQ EILIEGVVLA SLKENAELTE
201: NNTEAEFIEG LISLITHMHD HLTNIKQSQL GCSVPVPPDF RCPLSLELMT DPVIVTSGQT YERAFIEKWF DMGLMVCPKT RQPLTQTSLT PNFIVKAFIS
301: NWCESNNVNL PDPLELVQSS QPFPLLVEPA SDDDDDECDS QPLSLVDESE RGSSSSPMKI GGNGRTESLD ATKCKKLRQV LSRSVSAPGI VFELDSKTER
401: NTPPPAPAVT SVSQARVETV RRLPSARHFH HPGIIPATIR ETGSSSSIES EVKKLIEDLK SSSLEAQREA TARIRILSRN STDNRIVIAR CGAIDSLVNL
501: LYSTDERIQA DAVTCLLNLS INDNNKSVIA DSGAIEPLIH VLRTGNLEAK ENSAATLFSL SVIEENKTKI GEAGAIEPLV ELLGNGSLRG KKDAATALFN
601: LSIHHENKAK VIEAGAVRYL VELMDPAAGM VEKAVVVLAN LATVKEGKVA IGEEGGIPVL VEVVELGSAR GKENATAALL QLSMHSQRFC NSIIREGAIP
701: PLVALTKSGT ARAKEKAHNL LKYFKSQKQG QRRG

Best Arabidopsis Sequence Match ( AT5G67340.2 )
(BLAST)

001: MMVHMEVSWL RVLLDNISSY LSLSSMDDLS SNPAHKYYTR GEDIGKLIKP VLENLIDSDA APSELLNNGF EELAQYVDEL REQFQSWQPL STRIFYVLRI
101: ESLASKLRES SLEVFQLLKH CEQHLPADLI SPSFEECIEL VKLVARDEIS YTIDQALKDQ KKGVGPTSEV LVKIAESTGL RSNQEILVEG VVLTNMKEDA
201: ELTDNDTEAE YLDGLISLTT QMHEYLSDIK QAQLRCPVRV PSDFRCSLSL ELMTDPVIVA SGQTFERVFI QKWIDMGLMV CPKTRQALSH TTLTPNFIVR
301: AFLASWCETN NVYPPDPLEL IHSSEPFPLL VESVRASSSE NGHSESLDAE ELRQVFSRSA SAPGIVSEVV CKTKRNNNAA ADRSLTRSNT PWKFPEERHW
401: RHPGIIPATV RETGSSSSIE TEVKKLIDDL KSSSLDTQRE ATARIRILAR NSTDNRIVIA RCEAIPSLVS LLYSTDERIQ ADAVTCLLNL SINDNNKSLI
501: AESGAIVPLI HVLKTGYLEE AKANSAATLF SLSVIEEYKT EIGEAGAIEP LVDLLGSGSL SGKKDAATAL FNLSIHHENK TKVIEAGAVR YLVELMDPAF
601: GMVEKAVVVL ANLATVREGK IAIGEEGGIP VLVEVVELGS ARGKENATAA LLQLCTHSPK FCNNVIREGV IPPLVALTKS GTARGKEKAQ NLLKYFKAHR
701: QSNQRRG

Arabidopsis Description

PUB2U-box domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.