Factsheet for TraesCS3B01G443200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17146	Soybean	cytosol	65.75	70.17
GSMUA_Achr9P12570_001	Banana	cytosol	72.44	61.33
TraesCS3B01G422200.1	Wheat	cytosol	81.89	47.06
TraesCS3B01G443500.1	Wheat	cytosol	73.23	35.16
TraesCS2B01G213900.1	Wheat	cytosol	46.85	32.96
TraesCS3A01G410100.1	Wheat	cytosol	68.5	32.89
GSMUA_Achr4P01530_001	Banana	plasma membrane	77.56	32.24
PGSC0003DMT400027406	Potato	cytosol	29.53	28.09
TraesCS2B01G216300.1	Wheat	plastid	48.43	26.86
TraesCS3B01G591000.1	Wheat	cytosol	84.65	25.87
Os08t0110500-01	Rice	plasma membrane	83.86	25.85
CDX76873	Canola	cytosol, plastid	72.05	24.5
Zm00001d035040_P007	Maize	mitochondrion	83.86	24.43
Solyc12g100000.1.1	Tomato	cytosol, plastid	75.98	23.57
Solyc01g014230.2.1	Tomato	cytosol	75.2	23.55
PGSC0003DMT400046295	Potato	cytosol	75.98	23.51
CDY18649	Canola	cytosol, plastid	64.57	23.03
KRH72794	Soybean	plasma membrane	72.83	22.76
CDX81323	Canola	cytosol, plastid	64.57	22.68
AT5G67340.1	Thale cress	cytosol	62.99	22.63
VIT_07s0129g00590.t01	Wine grape	cytosol	75.2	22.52
AT2G23140.1	Thale cress	cytosol	73.23	22.44
KRG98177	Soybean	cytosol	74.02	22.35
Bra037117.1-P	Field mustard	cytosol, plastid	64.57	22.34
Zm00001d049708_P007	Maize	cytosol	77.56	22.34
KRH30135	Soybean	cytosol	72.44	21.96
TraesCS6B01G222200.1	Wheat	cytosol	36.22	21.96
EES14396	Sorghum	cytosol	83.86	21.15
CDY57440	Canola	cytosol	53.94	20.79
Bra012155.1-P	Field mustard	cytosol	53.94	20.79
CDY12838	Canola	cytosol	53.54	19.46
TraesCS6B01G324000.1	Wheat	cytosol	44.88	17.73
CDY46092	Canola	endoplasmic reticulum, golgi, plasma membrane, plastid	72.05	17.72
TraesCS2B01G294100.1	Wheat	nucleus	30.71	16.96
TraesCS5B01G087500.1	Wheat	cytosol	44.88	16.72
TraesCS7B01G186600.1	Wheat	cytosol	41.73	16.46
TraesCS7B01G473200.1	Wheat	cytosol	42.13	15.88
TraesCS4B01G206900.1	Wheat	plastid	45.67	15.14
TraesCS1B01G310100.1	Wheat	plastid	35.04	13.2
CDY38931	Canola	cytosol	31.89	13.17
Bra032180.1-P	Field mustard	cytosol	29.53	12.84
TraesCS3B01G377600.1	Wheat	plastid	33.07	12.23
TraesCS2B01G499300.1	Wheat	plasma membrane	31.1	11.47
TraesCS5B01G197400.1	Wheat	cytosol, plasma membrane, plastid	28.74	10.41

Protein Annotations

EnsemblPlants:TraesCS3B01G443200.1	EnsemblPlantsGene:TraesCS3B01G443200	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989	PANTHER:PTHR23315
PANTHER:PTHR23315:SF220	PFAM:PF00514	PFscan:PS50176	SEG:seg	SMART:SM00185	SUPFAM:SSF48371
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:683759693..683761247

Molecular Weight (calculated)

26864.6 Da

IEP (calculated)

8.651

GRAVY (calculated)

0.077

Length

254 amino acids

Sequence
(BLAST)

001: MENRIVIADC GAINLLVGLL HSPDAKIQEN AVTSLLNLSI SDNNKIAIVN AYAIDPLIHV LETGNPEAKE NSAATLFSLC ITEENKVSVG RSGAIKSLVD
101: LLRNGTPRGK KDAAHALFNL SILDENKGRI VQADAVKHLV KLMDPAAGMV DKAVVVLANL ALIAEGRTAI GQARGIPALV DVVELGSARG EENAVAALLQ
201: LCKNNNRSCS IVLQEGVLPP LVTLSRSGTS RAREKAQALL SYFHSQRRGN SGRG

Best Arabidopsis Sequence Match ( AT2G23140.1 )
(BLAST)

001: MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.