Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G193000.1 | Wheat | cytosol | 98.89 | 98.89 |
| TraesCS2D01G194400.1 | Wheat | cytosol | 98.89 | 98.89 |
| Os07t0587500-01 | Rice | cytosol | 93.63 | 93.37 |
| EER97464 | Sorghum | cytosol | 91.41 | 91.16 |
| Zm00001d021978_P001 | Maize | cytosol | 90.86 | 90.61 |
| Zm00001d006726_P001 | Maize | cytosol | 88.64 | 88.89 |
| GSMUA_Achr4P03430_001 | Banana | cytosol | 51.52 | 69.14 |
| GSMUA_Achr6P07710_001 | Banana | cytosol | 64.54 | 65.27 |
| CDY28679 | Canola | cytosol | 47.37 | 65.02 |
| Bra040513.1-P | Field mustard | cytosol | 47.37 | 65.02 |
| KRH15451 | Soybean | cytosol | 48.48 | 64.58 |
| GSMUA_Achr10P... | Banana | cytosol | 64.82 | 62.9 |
| GSMUA_Achr3P18890_001 | Banana | cytosol | 62.33 | 62.67 |
| Solyc12g088360.1.1 | Tomato | cytosol | 45.71 | 60.0 |
| Bra001006.1-P | Field mustard | plastid | 56.79 | 57.91 |
| KRH05594 | Soybean | cytosol | 56.23 | 57.67 |
| CDX74298 | Canola | plastid | 56.51 | 57.63 |
| CDX91947 | Canola | plastid | 55.96 | 57.22 |
| Bra020360.1-P | Field mustard | cytosol | 55.96 | 57.22 |
| CDY32692 | Canola | peroxisome | 55.96 | 57.22 |
| KRH52088 | Soybean | cytosol | 51.25 | 56.57 |
| PGSC0003DMT400027542 | Potato | cytosol | 55.68 | 56.46 |
| Solyc04g077850.2.1 | Tomato | cytosol | 55.68 | 56.46 |
| AT3G01400.1 | Thale cress | cytosol | 55.4 | 56.34 |
| GSMUA_Achr4P14130_001 | Banana | cytosol | 53.74 | 55.91 |
| CDY02828 | Canola | cytosol | 54.57 | 55.65 |
| GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 60.94 | 54.19 |
| PGSC0003DMT400030161 | Potato | cytosol | 53.19 | 53.63 |
| AT5G58680.1 | Thale cress | cytosol | 52.08 | 52.66 |
| GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 60.11 | 52.42 |
| VIT_18s0001g09130.t01 | Wine grape | cytosol | 53.74 | 50.0 |
| GSMUA_Achr5P16030_001 | Banana | cytosol | 63.99 | 49.04 |
| TraesCS3B01G443200.1 | Wheat | cytosol, endoplasmic reticulum | 32.96 | 46.85 |
| Zm00001d003967_P001 | Maize | plastid | 57.62 | 46.22 |
| TraesCS2B01G216300.1 | Wheat | plastid | 44.04 | 34.72 |
| TraesCS3B01G422200.1 | Wheat | cytosol | 39.61 | 32.35 |
| TraesCS6B01G222200.1 | Wheat | cytosol | 26.04 | 22.43 |
| TraesCS3B01G443500.1 | Wheat | cytosol | 31.02 | 21.17 |
| TraesCS2B01G294100.1 | Wheat | nucleus | 24.38 | 19.13 |
| TraesCS6B01G324000.1 | Wheat | cytosol | 34.07 | 19.13 |
| TraesCS3B01G591000.1 | Wheat | cytosol | 40.44 | 17.57 |
| TraesCS5B01G087500.1 | Wheat | cytosol | 32.69 | 17.3 |
| TraesCS4B01G206900.1 | Wheat | plastid | 33.52 | 15.8 |
| TraesCS7B01G186600.1 | Wheat | cytosol | 27.98 | 15.68 |
| TraesCS7B01G473200.1 | Wheat | cytosol | 29.09 | 15.58 |
| TraesCS1B01G310100.1 | Wheat | plastid | 28.53 | 15.28 |
| TraesCS3B01G377600.1 | Wheat | plastid | 27.98 | 14.7 |
| TraesCS2B01G499300.1 | Wheat | plasma membrane | 23.55 | 12.34 |
| TraesCS5B01G197400.1 | Wheat | cytosol, plasma membrane, plastid | 23.27 | 11.98 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G213900.1 | EnsemblPlantsGene:TraesCS2B01G213900 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | InterPro:IPR000225 | InterPro:IPR011989 | PANTHER:PTHR23315 |
| PANTHER:PTHR23315:SF64 | PFAM:PF00514 | PFscan:PS50176 | SEG:seg | SMART:SM00185 | SUPFAM:SSF48371 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:198636356..198637531
Molecular Weight (calculated)
37540.1 Da
IEP (calculated)
6.071
GRAVY (calculated)
0.088
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDASVSPR RRSCYSDSGD SSCSEPFSEC GSDDLSFTPA AAAGIHRLLL SCAAEASDGS ISELVAELES PSASVDSLRR AAMELRLLAK HNPDNRIRIA
101: ASGAVRPLVA LLSHADPLLQ EHGVTALLNL SICDENKAIM VEAGAIRPLV RALKSAASPA ARENAACALL RLSQLDGAAA AAVGRAGAIP LLVSLLETGG
201: ARGKKDAATA LYALCSGARE NRLRAVEAGA VRPLLDLMSD PESGMVDKAA YVLHSLVGFA EGRSATVEEG GIPVLVEMVE VGTSRQKEIA TLSLLQICDD
301: NAAYRTMVAR EGAIPPLVAL SQSSSARPKL KTKAEALIEM LRQPRSASLR ATRPAAIVAA E
101: ASGAVRPLVA LLSHADPLLQ EHGVTALLNL SICDENKAIM VEAGAIRPLV RALKSAASPA ARENAACALL RLSQLDGAAA AAVGRAGAIP LLVSLLETGG
201: ARGKKDAATA LYALCSGARE NRLRAVEAGA VRPLLDLMSD PESGMVDKAA YVLHSLVGFA EGRSATVEEG GIPVLVEMVE VGTSRQKEIA TLSLLQICDD
301: NAAYRTMVAR EGAIPPLVAL SQSSSARPKL KTKAEALIEM LRQPRSASLR ATRPAAIVAA E
001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.