Factsheet for Zm00001d006726_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021978_P001	Maize	cytosol	95.28	94.75
EER97464	Sorghum	cytosol	95.28	94.75
Os07t0587500-01	Rice	cytosol	90.28	89.78
TraesCS2A01G193000.1	Wheat	cytosol	89.44	89.2
TraesCS2B01G213900.1	Wheat	cytosol	88.89	88.64
TraesCS2D01G194400.1	Wheat	cytosol	88.33	88.09
GSMUA_Achr4P03430_001	Banana	cytosol	52.5	70.26
Bra040513.1-P	Field mustard	cytosol	48.33	66.16
CDY28679	Canola	cytosol	47.78	65.4
KRH15451	Soybean	cytosol	48.61	64.58
GSMUA_Achr6P07710_001	Banana	cytosol	62.78	63.31
GSMUA_Achr10P...	Banana	cytosol	64.44	62.37
GSMUA_Achr3P18890_001	Banana	cytosol	61.11	61.28
Solyc12g088360.1.1	Tomato	cytosol	46.39	60.73
Bra001006.1-P	Field mustard	plastid	56.94	57.91
KRH05594	Soybean	cytosol	56.39	57.67
CDX74298	Canola	plastid	56.67	57.63
CDX91947	Canola	plastid	56.39	57.51
AT3G01400.1	Thale cress	cytosol	56.39	57.18
CDY32692	Canola	peroxisome	55.56	56.66
Bra020360.1-P	Field mustard	cytosol	55.56	56.66
Solyc04g077850.2.1	Tomato	cytosol	55.83	56.46
KRH52088	Soybean	cytosol	51.11	56.27
PGSC0003DMT400027542	Potato	cytosol	55.56	56.18
CDY02828	Canola	cytosol	54.72	55.65
GSMUA_Achr4P14130_001	Banana	cytosol	53.06	55.04
PGSC0003DMT400030161	Potato	cytosol	54.17	54.47
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	60.28	53.45
AT5G58680.1	Thale cress	cytosol	51.94	52.38
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	59.44	51.69
VIT_18s0001g09130.t01	Wine grape	cytosol	53.33	49.48
GSMUA_Achr5P16030_001	Banana	cytosol	61.94	47.35
Zm00001d003967_P001	Maize	plastid	58.61	46.89
Zm00001d006705_P001	Maize	plastid	44.72	34.7
Zm00001d021951_P001	Maize	plastid	44.72	34.62
Zm00001d016501_P001	Maize	cytosol	26.39	20.43
Zm00001d045632_P004	Maize	cytosol, mitochondrion	34.72	19.84
Zm00001d000381_P001	Maize	cytosol	33.06	18.65
Zm00001d041548_P002	Maize	cytosol	33.06	17.71
Zm00001d031263_P001	Maize	cytosol	31.39	17.52
Zm00001d030732_P001	Maize	cytosol	32.22	17.44
Zm00001d028623_P001	Maize	cytosol	34.44	17.08
Zm00001d035040_P007	Maize	mitochondrion	40.56	16.74
Zm00001d014845_P001	Maize	cytosol	29.72	16.69
Zm00001d049708_P007	Maize	cytosol	39.44	16.1
Zm00001d042608_P002	Maize	cytosol	40.83	15.89
Zm00001d038471_P001	Maize	cytosol, plasma membrane, plastid	27.78	14.93
Zm00001d012494_P001	Maize	cytosol	26.94	14.63
Zm00001d043043_P001	Maize	cytosol	26.39	14.33
Zm00001d053544_P001	Maize	mitochondrion, plastid	26.39	13.48
Zm00001d016225_P001	Maize	plastid	27.22	13.44
Zm00001d020332_P001	Maize	cytosol	24.17	12.46
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	23.61	12.25

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	EMBL:BT061139
UniProt:C0HFN3	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000225	InterPro:IPR011989
ProteinID:ONM24803.1	PFAM:PF00514	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI0001948879	EnsemblPlantsGene:Zm00001d006726	EnsemblPlants:Zm00001d006726_P001	EnsemblPlants:Zm00001d006726_T001	SEG:seg

Description

ARM repeat superfamily protein

Coordinates

chr2:+:215373040..215374709

Molecular Weight (calculated)

37604.1 Da

IEP (calculated)

6.661

GRAVY (calculated)

0.004

Length

360 amino acids

Sequence
(BLAST)

001: MESDASTSPR RRSTSCYSDS GDSSCSEPFS ECGSDDLSFT PAAGIHRLLL SCASEASEDA ISSLVAELER PSPSLDSLRR AAMELRLLAK HNPDNRVRIA
101: AAGGVRPLVR LLAHADPLLQ EHGVTALLNL SLCDENKAAI IEAGAIRPLV RALKSAASPA ARENAACALL RLSQLDGASA AAIGRAGALP LLVSLLETGG
201: ARGKKDAATA LYALCSGARE NRQRAVEAGA VRPLLDLMAD PESGMVDKAA YVLHSLLGSG DGRAAAVEEG GIPVLVEMVE VGTSRQKEIA TLCLLQICED
301: NAVYRTMVAR EGAIPPLVAL SQSSSARTKL KTKAESLVEM LRQPRSPSLR ARPAAVVAAE

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.