Factsheet for GSMUA_Achr7P26200_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P03430_001	Banana	cytosol	52.66	81.04
GSMUA_Achr6P07710_001	Banana	cytosol	60.63	70.31
GSMUA_Achr4P14130_001	Banana	cytosol	57.0	68.01
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	66.43	67.73
GSMUA_Achr3P18890_001	Banana	cytosol	58.21	67.13
GSMUA_Achr10P...	Banana	cytosol	59.9	66.67
Bra040513.1-P	Field mustard	cytosol	39.37	61.98
CDY28679	Canola	cytosol	39.37	61.98
Os07t0587500-01	Rice	cytosol	53.38	61.05
KRH15451	Soybean	cytosol	39.37	60.15
TraesCS2B01G213900.1	Wheat	cytosol	52.42	60.11
TraesCS2D01G194400.1	Wheat	cytosol	52.42	60.11
TraesCS2A01G193000.1	Wheat	cytosol	51.93	59.56
Zm00001d006726_P001	Maize	cytosol	51.69	59.44
Zm00001d021978_P001	Maize	cytosol	51.93	59.39
EER97464	Sorghum	cytosol	51.69	59.12
Solyc12g088360.1.1	Tomato	cytosol	38.41	57.82
Solyc04g077850.2.1	Tomato	cytosol	47.83	55.62
PGSC0003DMT400027542	Potato	cytosol	47.58	55.34
Bra020360.1-P	Field mustard	cytosol	47.1	55.24
CDY32692	Canola	peroxisome	46.86	54.96
KRH52088	Soybean	cytosol	43.24	54.74
KRH05594	Soybean	cytosol	46.38	54.55
CDY02828	Canola	cytosol	46.62	54.52
CDX74298	Canola	plastid	46.38	54.24
CDX91947	Canola	plastid	46.14	54.11
Bra001006.1-P	Field mustard	plastid	46.14	53.95
AT3G01400.1	Thale cress	cytosol	46.14	53.8
PGSC0003DMT400030161	Potato	cytosol	45.89	53.07
GSMUA_Achr5P16030_001	Banana	cytosol	58.94	51.8
AT5G58680.1	Thale cress	cytosol	43.72	50.7
VIT_18s0001g09130.t01	Wine grape	cytosol	45.65	48.71
GSMUA_Achr9P12570_001	Banana	cytosol	31.4	43.33
Os03t0435300-00	Rice	cytosol	39.61	41.0
Zm00001d003967_P001	Maize	plastid	41.55	38.22
GSMUA_Achr4P06990_001	Banana	plastid	35.51	36.48
GSMUA_Achr4P11070_001	Banana	cytosol	35.99	35.31
GSMUA_Achr3P29830_001	Banana	cytosol	33.82	33.65
GSMUA_Achr1P22790_001	Banana	mitochondrion	35.02	32.01
GSMUA_Achr10P...	Banana	cytosol	22.22	24.6
GSMUA_Achr6P06560_001	Banana	cytosol	21.98	24.4
GSMUA_Achr4P01530_001	Banana	plasma membrane	35.75	24.22
GSMUA_Achr6P36530_001	Banana	cytosol	33.82	21.21
GSMUA_Achr9P01670_001	Banana	cytosol	23.67	21.03
GSMUA_Achr8P25140_001	Banana	plastid	21.01	20.71
GSMUA_Achr5P21360_001	Banana	cytosol	35.02	19.1
GSMUA_Achr3P00280_001	Banana	cytosol	23.91	16.42
GSMUA_Achr3P06160_001	Banana	plastid	22.22	16.23
GSMUA_Achr10P...	Banana	cytosol	23.91	15.81
GSMUA_Achr1P24290_001	Banana	cytosol	22.22	15.06
GSMUA_Achr4P00200_001	Banana	plastid	25.6	15.06
GSMUA_Achr9P15600_001	Banana	cytosol	23.91	14.64
GSMUA_Achr7P22130_001	Banana	cytosol	22.22	14.53
GSMUA_Achr9P14560_001	Banana	cytosol	20.29	14.36
GSMUA_Achr2P15530_001	Banana	mitochondrion	22.22	13.94
GSMUA_Achr6P34170_001	Banana	cytosol	22.22	13.86
GSMUA_Achr5P28670_001	Banana	cytosol	18.84	13.68
GSMUA_Achr4P04900_001	Banana	cytosol	16.18	12.69
GSMUA_Achr9P28820_001	Banana	mitochondrion	17.87	12.35
GSMUA_Achr4P05030_001	Banana	cytosol	15.46	12.21
GSMUA_Achr5P07140_001	Banana	cytosol	17.87	11.78
GSMUA_Achr7P09440_001	Banana	mitochondrion	17.63	11.44
GSMUA_Achr10P...	Banana	cytosol	23.67	11.34
GSMUA_Achr10P...	Banana	mitochondrion	9.42	8.63

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr7G26200_001	EnsemblPlants:GSMUA_Achr7P26200_001	EnsemblPlants:GSMUA_Achr7T26200_001	InterPro:IPR000225
InterPro:IPR011989	UniProt:M0TKV6	PFAM:PF00514	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF64
SMART:SM00185	SUPFAM:SSF48371	SignalP:SignalP-noTM	UniParc:UPI00029572CF	SEG:seg	:

Description

spotted leaf 11, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G26200_001]

Coordinates

chr7:+:27563932..27566559

Molecular Weight (calculated)

43916.6 Da

IEP (calculated)

8.826

GRAVY (calculated)

0.128

Length

414 amino acids

Sequence
(BLAST)

001: MRTLLICLLL RLLAAGLLTC ARAPLPVFKS ILLTPSQRQH IILRPRPPSP SFILSGGLAR TLDPMEVMVM ESRPEIGPQM SRSCSDGGFS DCNSDRSGEF
101: SPTGGAFSLR RLLVSSSSSE YSDEVVRGLI SELESPSVES QCRAATQLRF LAKHSPENRI RIARAGAVAP LVALLSHPDP QLQEQGVTAV LNLSLCDENK
201: ATIAAAGAVG HLVRTLCFGT PAARGNAACA LLRLAQLDDL RAAIGGSGAI PALVALLETG GSRGKKDAAT ALFTLLASKE NSSRAVEAGV VRPLLDLMAD
301: PESGMVDKAA YVLHRVLALR EGRVAAVDEG GLPVLVEMVD VGSQRQKEVA MLSLLQICEE SSAYRRMVVR EGAIPSFVAL SQSSSKKIRE KAEALIALLR
401: QPTSPSTKRP MALA

Best Arabidopsis Sequence Match ( AT2G23140.3 )
(BLAST)

001: MAEQSENNAE VEFLDQLIVI VNRMHERLLL IKQTQTSSVA ILADFFCPLS LEVMTDPVIV SSGQTYEKAF IKRWIDLGLK VCPKTRQTLT HTTLIPNYTV
101: KALIANWCET NDVKLPDPNK STSLNELSPL LSCTDSIPST GADVSARKVS NKSHDWDASS SETGKPSFSS RATEREGASP SRPASALGAS SPGISGNGYG
201: LDARRGSLND FEDRSNDSRE LRTDAPGRSS VSSTTRGSVE NGQTSENHHH RSPSATSTVS NEEFPRADAN ENSEESAHAT PYSSDASGEI RSGPLAATTS
301: AATRRDLSDF SPKFMDRRTR GQFWRRPSER LGSRIVSAPS NETRRDLSEV ETQVKKLVEE LKSSSLDTQR QATAELRLLA KHNMDNRIVI GNSGAIVLLV
401: ELLYSTDSAT QENAVTALLN LSINDNNKKA IADAGAIEPL IHVLENGSSE AKENSAATLF SLSVIEENKI KIGQSGAIGP LVDLLGNGTP RGKKDAATAL
501: FNLSIHQENK AMIVQSGAVR YLIDLMDPAA GMVDKAVAVL ANLATIPEGR NAIGQEGGIP LLVEVVELGS ARGKENAAAA LLQLSTNSGR FCNMVLQEGA
601: VPPLVALSQS GTPRAREKAQ ALLSYFRNQR HGNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.