Factsheet for GSMUA_Achr4P10960_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P03430_001	Banana	cytosol	56.65	85.5
GSMUA_Achr6P07710_001	Banana	cytosol	64.29	73.11
GSMUA_Achr4P14130_001	Banana	cytosol	59.11	69.16
GSMUA_Achr10P...	Banana	cytosol	62.81	68.55
GSMUA_Achr3P18890_001	Banana	cytosol	59.85	67.69
Bra040513.1-P	Field mustard	cytosol	43.1	66.54
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	67.73	66.43
CDY28679	Canola	cytosol	42.86	66.16
KRH15451	Soybean	cytosol	42.36	63.47
Os07t0587500-01	Rice	cytosol	55.42	62.15
Solyc12g088360.1.1	Tomato	cytosol	41.63	61.45
TraesCS2B01G213900.1	Wheat	cytosol	54.19	60.94
TraesCS2D01G194400.1	Wheat	cytosol	54.19	60.94
Zm00001d021978_P001	Maize	cytosol	53.94	60.5
TraesCS2A01G193000.1	Wheat	cytosol	53.69	60.39
Zm00001d006726_P001	Maize	cytosol	53.45	60.28
EER97464	Sorghum	cytosol	53.69	60.22
CDY32692	Canola	peroxisome	49.51	56.94
Solyc04g077850.2.1	Tomato	cytosol	49.51	56.46
CDY02828	Canola	cytosol	49.01	56.21
Bra020360.1-P	Field mustard	cytosol	48.77	56.09
PGSC0003DMT400027542	Potato	cytosol	49.01	55.9
KRH52088	Soybean	cytosol	44.83	55.66
CDX74298	Canola	plastid	48.52	55.65
Bra001006.1-P	Field mustard	plastid	48.52	55.65
GSMUA_Achr5P16030_001	Banana	cytosol	64.53	55.63
CDX91947	Canola	plastid	48.28	55.52
KRH05594	Soybean	cytosol	48.03	55.4
AT3G01400.1	Thale cress	cytosol	47.78	54.65
PGSC0003DMT400030161	Potato	cytosol	48.03	54.47
AT5G58680.1	Thale cress	cytosol	46.31	52.66
VIT_18s0001g09130.t01	Wine grape	cytosol	48.28	50.52
GSMUA_Achr9P12570_001	Banana	cytosol	33.99	46.0
Os03t0435300-00	Rice	cytosol	43.35	44.0
Zm00001d003967_P001	Maize	plastid	44.83	40.44
GSMUA_Achr4P06990_001	Banana	plastid	38.42	38.71
GSMUA_Achr4P11070_001	Banana	cytosol	38.67	37.2
GSMUA_Achr3P29830_001	Banana	cytosol	35.96	35.1
GSMUA_Achr1P22790_001	Banana	mitochondrion	38.18	34.22
GSMUA_Achr10P...	Banana	cytosol	24.88	27.01
GSMUA_Achr4P01530_001	Banana	plasma membrane	38.67	25.7
GSMUA_Achr6P06560_001	Banana	cytosol	23.15	25.2
GSMUA_Achr6P36530_001	Banana	cytosol	36.7	22.58
GSMUA_Achr9P01670_001	Banana	cytosol	25.62	22.32
GSMUA_Achr8P25140_001	Banana	plastid	22.17	21.43
GSMUA_Achr5P21360_001	Banana	cytosol	37.19	19.89
GSMUA_Achr3P00280_001	Banana	cytosol	26.35	17.74
GSMUA_Achr10P...	Banana	cytosol	26.85	17.41
GSMUA_Achr1P24290_001	Banana	cytosol	24.38	16.2
GSMUA_Achr9P15600_001	Banana	cytosol	26.35	15.83
GSMUA_Achr3P06160_001	Banana	plastid	21.92	15.7
GSMUA_Achr6P34170_001	Banana	cytosol	24.63	15.06
GSMUA_Achr4P00200_001	Banana	plastid	25.86	14.91
GSMUA_Achr9P14560_001	Banana	cytosol	20.94	14.53
GSMUA_Achr2P15530_001	Banana	mitochondrion	23.4	14.39
GSMUA_Achr7P22130_001	Banana	cytosol	22.17	14.22
GSMUA_Achr5P28670_001	Banana	cytosol	19.21	13.68
GSMUA_Achr4P04900_001	Banana	cytosol	17.0	13.07
GSMUA_Achr5P07140_001	Banana	cytosol	19.95	12.9
GSMUA_Achr4P05030_001	Banana	cytosol	16.26	12.6
GSMUA_Achr9P28820_001	Banana	mitochondrion	18.47	12.52
GSMUA_Achr10P...	Banana	cytosol	26.6	12.5
GSMUA_Achr7P09440_001	Banana	mitochondrion	18.47	11.76
GSMUA_Achr10P...	Banana	mitochondrion	9.36	8.41

Protein Annotations

EnsemblPlants:GSMUA_Achr4P10960_001	EnsemblPlants:GSMUA_Achr4T10960_001	EnsemblPlantsGene:GSMUA_Achr4G10960_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	PFAM:PF00514	PFscan:PS50176	SEG:seg	SignalP:SignalP-noTM
SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000295103D	UniProt:M0SMW3	MapMan:35.1	:

Description

spotted leaf 11, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G10960_001]

Coordinates

chr4:-:7914350..7915662

Molecular Weight (calculated)

43662.9 Da

IEP (calculated)

7.443

GRAVY (calculated)

-0.006

Length

406 amino acids

Sequence
(BLAST)

001: MAIGLFILLL CYACFALFSK GNEAYHIIRF LLELDWGFHP IAMMLMENPP EFGRHARRSY SDGAGSSGAF SDCNSQCSAS GNGASSLRRL LASDYYSDEE
101: VRGLISDLGS PSVESRRRAA MELRLLAKHS TENRLRIARA GAVVPLVALL SHPDPQLQEH GVTAILNLSL CDENKGPIAA AGAVRYLVRA LRSGTPAARE
201: NAACALLRLA QLDDLRAVIG RSGAIPPLVA LLETGGSRGK KDAATALFTL LAAKENKARA VEAGVVRPLL DLMADPESEM VDKAAYVLHR LLSEPEGRAS
301: AVEEGGVPVL VEMVEVGSQR QKEVAMLSLL EICEESAAYR KMVIREGAIP PLIALSQSSS KKTKDKAEAL IELLRRPTTK LMDYSQQRTT RGCSALPVDG
401: DGLVQA

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.